Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g04785 TCCGCCTCGCCTCTCAAGGACGACTTGAAGTGCTCGAAACCGGAGTCTCCGATTTTGATTTTCTTGTTTTTTCACAAAGCGATTCGGAATGAGCTTGAGGCTCTGCACCGGTTGGCCTTGGCATTCGCCACCGGCAACCGCTCCGACATTCAGCCGCTCTCCGAGCGCTACCATTTCCTCAGCTCCATGTACAGGCACCACTCCAATGCTGAAGACGAGGTGATATTTCCAGCTTTGGATATACGTGTGAAGAATGTAGCACAGACATATTCTCTCGAACACAAGGGTGAAAACAACCTTTTTGATCATCTATTTGAGCTTTTAAACTCTTCCATCAATAATGATGAAACTTTTCCAAGAGAGTTAGCGTCCTGCACAGGAGCTTTGCAGACGTCAGTTAGTCAACATATGGCAAAGGAAGAGGAGCAGTTACTCTCTTCTGTGGATGGAGTTGCAAGGCTCGTAGTGAAGGTCAGTGTTTGTCTTCAGGTGCATCAGGCTGCTGTCCTGCACATAAACTCTCTGACATTGAAGAATACATTGATCCATTATCCCGTGCTTGTTCATCTGCATTATCTAATAGACATTGCTCAGTATTAG 600 0.4617 SASPLKDDLKCSKPESPILIFLFFHKAIRNELEALHRLALAFATGNRSDIQPLSERYHFLSSMYRHHSNAEDEVIFPALDIRVKNVAQTYSLEHKGENNLFDHLFELLNSSINNDETFPRELASCTGALQTSVSQHMAKEEEQLLSSVDGVARLVVKVSVCLQVHQAAVLHINSLTLKNTLIHYPVLVHLHYLIDIAQY 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g04785 199 CDD Hr-like 20 145 - -
Vimu11g04785 199 Gene3D nmb1532 protein domain like 15 148 - -
Vimu11g04785 199 Pfam Hemerythrin HHE cation binding domain 21 145 IPR012312 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g04785 16 145 C2H2 Transcription Factor Family AT3G18290 75.385 7.18e-61 202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g04785 K16276 - gmx:100803002 267.314
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g04785 11 67951794 67957456 Vimu11g04785 11 67951794 67957456 ECH