Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vimu11g04721 | ATGAAGAAGAAACAAGGACACTCCTTTAATCTAAGACTCCTCCTCCTCCTTGGCTTCTTTCTGGTCACATGTGCCAATGCCTCCCTTCTCACGCCAACCCAATCGCGCCATCTTCTCTACTACACAGACGAGTTTGGAGATAGAGGCGAGAATGTCACCGTAGACCCTTCCCTTGCTTTCGAAAATGACCGTCTCAGAAACGCTTACATAGCTCTGCAAGCTTGGAAGCTCGCCATTTTATCTGATCCCCGCAACCAGACAACCGACTGGGTAGGATCCGACGTTTGTAGCTACACCGGTGTATACTGTGCTCAAGCGCTCGACAACCCCTCCCTCCGTACAGTCGCCGGCATTGATCTCAACCATCAGGACATTGCCGGCTATTTACCGGAGGAGCTCGGTTTGCTCGTAGATCTTGCACTCTTCCACATCAACTCCAACAGATTCTGTGGCACTGTGCCCCACACGTTCCGGAAGTTGGTACTCCTCTACGAGCTGGATCTCAGTAACAACCGCTTTGCGGGGAGGTTCCCTGAGGTGGTTCTGCGCCTTCCTTCGCTCAAGTTCTTGGATCTTAGGTTCAACGAATTCGAAGGAGCTGTGCCCAGGGAATTGTTCGACAAAGATCTCGACGCCATTTTCATCAACGACAACCGTTTCGTCTTTGACCTTCCAGACAACTTCGGCAACTCCCCCGTCTCCGTCATCGTCCTCGCCAACAACAGATTCCACGGCTGCATTCCCCACAGCCTCGGCAACATGTCCAACCTCAACGAGATCATTCTCATGAACAACGCATTCCGATCCTGCTTGCCCTCCGAGATAGGCTTGTTGAAGAATCTCACGGTGTTCGACGTCAGCTTTAACCAACTTCTCGGCCCCTTACCAAGCGCCGTAGGAAATGCCGTCAGCTTGGAACAGCTCAACGTGGCCCACAACTTACTCTCCGGTCAAATTCCTCCCAGTATATGTATGTTGCCTCACCTTCTCAACTTCACTTACTCCTTTAACTTCTTCACCGGCGAGCCTCCTGCCTGTCTCGCCTTGCCGGCGTTTGACGATAGGATCAACTGCTTGCCGGCGAGGCCCGTTCAGAGGCCTCCGGCGCAATGCCAGGCTTTCTTGTCTAAGCCTGTGGACTGTAACTCCTTTAACTGCAAGCCATTTGTTCCTTCACCTCTTTCCCCCACAACACCTGCAACTCCTTCACCACCATCTCCTGGGACACCTTCGCCTCCATCAACTGGGACACCTTCACCAGTAACTCCTTCGCCTTCATCACCTGGGACACCTTCACCTGTAACTCCTTCACCACCATCTCCTGGGACACCTTCACCTATAACTCCTTCGCCTCCATCACCAGGCACACCTTCACCTGTAACTCCTTCCCCACCATCTCCTGGGACACCTTCACCTGTAACTCCTTCGCCTCCATCTCCTGGAACACGTTCACCAGGAACTCCTTCGCCTCCATCACCTGGGACACCTTCACCTGTAACTCCTTCGCCACCATCTCCTGGGTCACCCTCGCCTGTAACTCCTTCGCCTCCATCACCTGGGACACCTTCACCCGTAAATCCTTCGCCGTTACCTTCACCTACAACACCTTCGCCTCCTTCACCTGCCGCACCTTCCCCACTACCTACACCTCCTTCGGAACCACCGGTGGTGGGACATTCCCCTCCACCCCGGCCAGTGGCACCTTCTCCACTACCACCCATTCACACTCCTCCTTCACCGGTGTATTTGCCACCACCACATTCTTCCCCTGCTCCACCTGGATACTCTTCACAACCTCCTCCACCTTCGCAATTGCCGCCTCCATCATACACTCCGCCTTCTCCAGTGACACCTTTTCCTACTCCAACGCCACCCAATGGTGTTCACTCTCCACCGCCACCGGCTCCTACATTCTCGACACCACCACCTTCACATAATTATGGCTCATCGCCACCTCCTACACCTCATCACTCACCATCACCTCATCCTTACCCTTATTTATCACCCCCACCACCTCCTTATCCTGTTCGTGTTCCACCTCCACCACCACCTTGTACAGAACTTCTTCCACCCCCTCCACAATCAACACCTTCTCCCACACCTTACCTCCCACCACCATCCCCATCTCACCCACCTTATCACCCATCACCATCCCCTTCTCACCCATCACCTTATCACCCGCCACCATCCCTTTCTCCCTCTCCAACTCCACCGGTTCAATACAGTTCGCCTCCCCCGCCGCCTCCTCCACCAGCAGTTTCTCCACCGCCACCTGTTGTATGCCAAAACCCACCACCTGCCCCTGTATATGAAGGGCCATTGCCACCCATCGTGGGACTCCCATACGCATCGCCTCCGCCACCACCCTTTTATTGA | 2376 | 0.5438 | MKKKQGHSFNLRLLLLLGFFLVTCANASLLTPTQSRHLLYYTDEFGDRGENVTVDPSLAFENDRLRNAYIALQAWKLAILSDPRNQTTDWVGSDVCSYTGVYCAQALDNPSLRTVAGIDLNHQDIAGYLPEELGLLVDLALFHINSNRFCGTVPHTFRKLVLLYELDLSNNRFAGRFPEVVLRLPSLKFLDLRFNEFEGAVPRELFDKDLDAIFINDNRFVFDLPDNFGNSPVSVIVLANNRFHGCIPHSLGNMSNLNEIILMNNAFRSCLPSEIGLLKNLTVFDVSFNQLLGPLPSAVGNAVSLEQLNVAHNLLSGQIPPSICMLPHLLNFTYSFNFFTGEPPACLALPAFDDRINCLPARPVQRPPAQCQAFLSKPVDCNSFNCKPFVPSPLSPTTPATPSPPSPGTPSPPSTGTPSPVTPSPSSPGTPSPVTPSPPSPGTPSPITPSPPSPGTPSPVTPSPPSPGTPSPVTPSPPSPGTRSPGTPSPPSPGTPSPVTPSPPSPGSPSPVTPSPPSPGTPSPVNPSPLPSPTTPSPPSPAAPSPLPTPPSEPPVVGHSPPPRPVAPSPLPPIHTPPSPVYLPPPHSSPAPPGYSSQPPPPSQLPPPSYTPPSPVTPFPTPTPPNGVHSPPPPAPTFSTPPPSHNYGSSPPPTPHHSPSPHPYPYLSPPPPPYPVRVPPPPPPCTELLPPPPQSTPSPTPYLPPPSPSHPPYHPSPSPSHPSPYHPPPSLSPSPTPPVQYSSPPPPPPPPAVSPPPPVVCQNPPPAPVYEGPLPPIVGLPYASPPPPPFY | 791 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vimu11g04721 | 791 | FunFam | Leucine-rich repeat extensin-like protein 5 | 231 | 370 | - | - | |
Vimu11g04721 | 791 | Gene3D | Ribonuclease Inhibitor | 68 | 353 | IPR032675 | - | |
Vimu11g04721 | 791 | MobiDBLite | consensus disorder prediction | 394 | 791 | - | - | |
Vimu11g04721 | 791 | PANTHER | LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED | 26 | 522 | - | - | |
Vimu11g04721 | 791 | Pfam | Leucine rich repeat N-terminal domain | 71 | 103 | IPR013210 | - | |
Vimu11g04721 | 791 | PRINTS | Proline rich extensin signature | 428 | 445 | - | - | |
Vimu11g04721 | 791 | PRINTS | Proline rich extensin signature | 446 | 471 | - | - | |
Vimu11g04721 | 791 | PRINTS | Proline rich extensin signature | 407 | 423 | - | - | |
Vimu11g04721 | 791 | PRINTS | Proline rich extensin signature | 384 | 405 | - | - | |
Vimu11g04721 | 791 | FunFam | Leucine-rich repeat extensin-like protein 1 | 69 | 230 | - | - | |
Vimu11g04721 | 791 | SUPERFAMILY | L domain-like | 78 | 350 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vimu11g04721 | Vimu-Chr11 | 67486336 | 67490369 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vimu11g04721 | 33 | 393 | Leucine-rich Repeat extension Gene Families | AT3G24480 | 75.414 | 0.0 | 592 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vimu11g04721 | - | - | vum:124830001 | 772.696 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Vimu11g04721 | 11 | 67486336 | 67490369 | Vimu11g04721 | 11 | 67486336 | 67490369 | ECH |