Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g04718 ATGTTTGTATTATCACATTACAATTCTGTTTTGGTTAGCAAAAGTAGAAACAGAGTGATGTCTGGTGTTAGCAATGGCGATGCCGCCTCCGTCAAGAAGCTCCCGTCGGTCAAGTTCACCAAGCTTTTCATCGACGGAGAGTTTGTAGACTCTGTCTCAGGAAAGACATTCGAGAGCATAGATCCAAGAAGTGGAGAGGTTATAGCAAGTATCAGCGAAGGAGATAAAGAAGACATAGACATTGCTGTTAAAGCAGCACGTCACGCCTTTGACTTTGGTCCTTGGCCTCGCATGTCTGGCGCTGATAGAGCTAAAATACTGATGAAATGGGCGGAACTAATTGATGAACACGCAGAAGAACTTGCAACACTGGATGCCATTGATGCAGGGAAGCTGTATCACACGTGTAAGAATTTGGAAGTTCCAGCATCCGCAAACACTCTACGTTACTATGCAGGTGCTGCCGATAAGATTCATGGAGAGGTCTTGAAAATGTCTAGAGAGTTCCATGCGTACACATTACTGGAACCAGTTGGTGTTGTGGGACACATAACTCCTTGGAATTTTCCCAATACCATGTTTTATATTAAGGTTGCTCCTTCTTTAGCTGCTGGTTGCACCATGGTCGTCAAGCCTGCTGAGCAAACACCCCTCTCTGCTCTGTATAACGCTCATCTTTCTAAGTTGGCTGGAATTCCAGATGGAGTGATCAATGTTGTGACAGGATTTGGCCCAACTGCTGGTGCTGCATTAAGTTCACACATGGATGTCGATAAGGTCAGCTTTACTGGTTCAACCCAAACGGGTCGTGAGATAATGCAGGCTGCAGCTAAGAGTAACTTGAAACAAGTTTCACTTGAATTAGGAGGCAAGTCACCCCTCATAATTTTCGATGATGCTGATGTAGAAAAAGCTGCTGAGCTTGCTTTAATCGGGATCCTATATAACAAGGGTGAAGTTTGTGTAGCAAGTTCTCGTGTATTTGTTCAAGAAGGGATCTATGATGAATTTGAGAAAAAATTGTTGGAGAAGGCAAAAGCTTGGGTGGTTGGAGATCCTTTTGATCCTAAAGTCCAACAAGGACCACAGGTTGACAAGGAACAGTTTGAGAAGATTCTTTCATATATTGAGCATGGAAAGAGAGAAGGAGCAACCCTTTTAACCGGTGGTAAAACATTGGGCAATAAGGGCTACTTCATTGAGCCAACAATTTTCTCTGATATAAAGGACGATATGCTGATAGCACAAGATGAAATATTTGGCCCTGTGATGGCGTTGAAGAAGTTTAAGAGCATTGAAGAAGCAATTAAAAGTGCGAATAATAGTAAGTATGGGTTAGCAGCAGGCATAGTGACAAAGAATTTGGATACAGCAAATACAGTGTCAAGGTCGATTCGTGCAGGTACCGTTTGGATCAATTGCTACTTTGCCTTTGGTGATGATGTTCCCTTTGGAGGGTACAAGATGAGTGGATTTGGAAAAGACCATGGCTTGGAAGCCCTTCACAAATACTTGCAAGTTAAATCTGTTGTAACTCCTCTTTACAATTCTCCTTGGCTTTGA 1563 0.4287 MFVLSHYNSVLVSKSRNRVMSGVSNGDAASVKKLPSVKFTKLFIDGEFVDSVSGKTFESIDPRSGEVIASISEGDKEDIDIAVKAARHAFDFGPWPRMSGADRAKILMKWAELIDEHAEELATLDAIDAGKLYHTCKNLEVPASANTLRYYAGAADKIHGEVLKMSREFHAYTLLEPVGVVGHITPWNFPNTMFYIKVAPSLAAGCTMVVKPAEQTPLSALYNAHLSKLAGIPDGVINVVTGFGPTAGAALSSHMDVDKVSFTGSTQTGREIMQAAAKSNLKQVSLELGGKSPLIIFDDADVEKAAELALIGILYNKGEVCVASSRVFVQEGIYDEFEKKLLEKAKAWVVGDPFDPKVQQGPQVDKEQFEKILSYIEHGKREGATLLTGGKTLGNKGYFIEPTIFSDIKDDMLIAQDEIFGPVMALKKFKSIEEAIKSANNSKYGLAAGIVTKNLDTANTVSRSIRAGTVWINCYFAFGDDVPFGGYKMSGFGKDHGLEALHKYLQVKSVVTPLYNSPWL 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g04718 520 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 286 293 IPR029510 GO:0016491
Vimu11g04718 520 FunFam Aldehyde dehydrogenase, putative 482 508 - -
Vimu11g04718 520 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 290 479 IPR016163 GO:0016620
Vimu11g04718 520 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 314 325 IPR016160 GO:0016491
Vimu11g04718 520 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 44 508 IPR016162 GO:0016491
Vimu11g04718 520 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 27 510 - -
Vimu11g04718 520 FunFam Aldehyde dehydrogenase3 290 479 - -
Vimu11g04718 520 FunFam ALD5p Mitochondrial aldehyde dehydrogenase 44 307 - -
Vimu11g04718 520 Pfam Aldehyde dehydrogenase family 48 510 IPR015590 GO:0016491
Vimu11g04718 520 SUPERFAMILY ALDH-like 34 516 IPR016161 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g04718 Vimu-Chr11 67460941 67464439 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g04718 21 520 Aldehyde Dehydrogenase Gene Family AT3G24503 70.060 0.0 749
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g04718 K12355 - gmx:100811540 912.524