Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g04708 ATGGAAAACCAAACCGGTCTCAAGCTCAGAATCTCTCGCATGTTCAGATCCTCCTTCGGTTCCTGTCGAACAAGACACATAGCCGATGTGATGGAAAAAGCAGTTTTTGCACCACCCACCACCATTGACCCACCTTCTCCCAAAACCACACCCTTTGCTCCCACTTGTAGGTCCAAAACAATCAATGACACTTGCATACTCTCCTTTGACGATTCTCATTCTCTCTCTAGACGCAAAATCTCACATTTTTCATCACCTTTTCTCTGGGCCAACACCACCACTGCCACCACCAACAACCTCAAGCTTAACCTCGGTGTCATGTCATGTCCCCCCACTTCTCCCAAACTTTCCCTTGACAAAATCCAAGACCACGATTTCATTTTCCACGACAAAAACAAGACTTCATCTTCTACAAAAAACGTTAAGACCAAGAAAAAGAAGAAGAAGAGACGTGCCCGTAAGAGAAGGGACTTTTTCCCTTTCAATTCATGCTCCAAAGACACCAACTTTGGTGGCTACTGGTGGTACAGCAGCGACGAAGACGATGAAACTGACACCCTTTTTTCCTCCAAGAGCCTCTCCTCCGACTCCTCCAGGTCCCGGCGCCGTGGCCGGAAAAGTGACCGGAGCTCCGACATGGGTGTTCTGCCGCTGCACGGGAAGGTGAAGGACACGTTCGCGGTGGTGAAGCGCTCGAGCGATCCTTACAGTGATTTCAGGACTTCGATGCTGGAGATGATCGTGGAGAAGCAGATATTTTCGCCAGCGGATTTGGAGAATCTCTTGCAGTGTTTTCTGTCTCTGAATTCGTATCATCATCATAAGATCATTGTCCAAGTCTTCACCGAGATTTGGGAGGCTTTGTTCTCTGACTGGTTTTGA 882 0.4819 MENQTGLKLRISRMFRSSFGSCRTRHIADVMEKAVFAPPTTIDPPSPKTTPFAPTCRSKTINDTCILSFDDSHSLSRRKISHFSSPFLWANTTTATTNNLKLNLGVMSCPPTSPKLSLDKIQDHDFIFHDKNKTSSSTKNVKTKKKKKKRRARKRRDFFPFNSCSKDTNFGGYWWYSSDEDDETDTLFSSKSLSSDSSRSRRRGRKSDRSSDMGVLPLHGKVKDTFAVVKRSSDPYSDFRTSMLEMIVEKQIFSPADLENLLQCFLSLNSYHHHKIIVQVFTEIWEALFSDWF 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g04708 293 MobiDBLite consensus disorder prediction 131 153 - -
Vimu11g04708 293 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 122 290 IPR038933 GO:0045892
Vimu11g04708 293 MobiDBLite consensus disorder prediction 196 212 - -
Vimu11g04708 293 MobiDBLite consensus disorder prediction 138 153 - -
Vimu11g04708 293 MobiDBLite consensus disorder prediction 188 216 - -
Vimu11g04708 293 Pfam Transcriptional repressor, ovate 232 289 IPR006458 -
Vimu11g04708 293 NCBIfam uncharacterized plant-specific domain TIGR01568 226 289 IPR006458 -
Vimu11g04708 293 ProSiteProfiles OVATE domain profile. 228 287 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g04708 Vimu-Chr11 67388628 67389952 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Vimu11g04708 Ovate 3.2e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g04708 - - gmx:100776613 407.912
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g04708 11 67388628 67389952 Vimu11g04708 11 67388628 67389952 ECH