Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g04702 ATGTATAGATCATTTCTGAAATGTGATGATCCAAAAGGAGTTGTAGGATGTGGGACAATCAGGAAATACAGAACTCGTTCTCACAAAGTGAAGGACAAGACAAAAATGCAGAAGACAAGTGAAATAATGGAAACATCCTTGATCTACAAGAGATACAAAGAGGAGAAGAATGTCGCCAAAGAATGCGATGGAAATCTCGTTGGTCCATCATCTTTGCAGCTCACAAAGGTCTCCGAAGAGGATCATAGCTTGAGCAATATGCTAGATTCATGGTCTAGAGATATTATATGTGAAGGAAAGTCCGAAGATATAGCAAAAGGTATTTTAAAAGGGGCTCTTGGTCTGCAAGATTCTCTAAGCATGCTTCGCAAGTTGCAAGAGGAGGCCGCACAACATACAGCTCCTTTTGGGAGAAAACAGACTGAGAAACCAGAAAGAGACAGAATTGATGAAAACAAGATTGGTATAAGGCAGGCTAATCCATTAGGGGAACAAAGTAATACAAAGGGGTTTCAAAGACCACAGCTTTCTGCTGGTGGTTCTTCGAGTAACTGCAAAGAGGAACTTAAGAAGGTGATTAAGGAGAGTTTGGTTAGGCAAAATATGTTTCCAAAGACCTCTGACGGATTTAATTCAGGTTCAGAAACTTTTCATATAAGCACAAGCCAATGCTCTGGGGTCAAGACTGACAGCCTTTATGATCCTTCTTTATCAGTAATTGCTTCAAGGATTGGAAAAGGACCTAGCCTAGTTTTCAAGCTGATGGGTTTAGAAGAAGGCCCCTCAAAATCATTTCCAGCTGCTAAGCAAAAACTATTGAGTGGTGAGATAGATAAGTCAAAGGTCAGAAACAATGATTCTACAGCTGAGAAGGTTAATCCAGAACTAAAAGTCGTGAGGGAAACTCTTGAGACTACGCATTTCAAAGGTATTTTTAAGGAGAATTTTGTGAAAGATTCTAAGCTTCATGTGCATCATCATTTCAATGACACCAGTTCCAAACAGTTTGTTGATTTATCTCACATTTCACCTACGGAACCTCAATGTACAATTTACCAACAATCAGAAAAAAGTGCCTATATTCCAGTTCTTCCAAAGGAGTTGACAAAACTGAGAAGAGAAATACTCTCTTCCAAAACTATCAAACATAGAAAAGGTTCCAGTTCCACCAACATGGGAAAAGGAATGGAAAAGGGTATTAGGAAACGGCTTAAGAAAGAGGGAGAACCAAAATTTCTCAAAGAGGTTATTAGAGTGGATGCAAAAGGAAGCAGTCCTGTTGAAGAATATGCGGGTAAGGTAAAACTGTATTGTCACATTGGTCACACATCACATGTAAATGAGACAATTGATAGAAAATGGAAGGTACGGCCCATTAGCAGAAAACAGACAGAAAAGGATATCTCACAACAAACAATTGTGGAAGAACATCAGTACAAACGAGAAATCCCCTCCACAAAATTGAGGAAGCTGAAAAGTGGATCCAGAATCGACAAGAATGAGATTTCCTGCCTAAAGAGTAGAGGTTCAAACAACATCTCCACTAAAAAAACTACGAATTCCAAGGACGTTAAAGTTGAGAATAAAAAAGTTAATTCCGAGGTAGATTCCTTAACAGGTAGAAAGAATCAAATGAAAAAACAAAGCCCTGTTGCTGAGCCAGAACTGGCTAAACTAACTGTTGAACAAACCAGGCAGAGAGAAAAAAAGAAAAATTACCCCGAGATTAGAATCTCCACTAGACTAGAAGATGAGCTCCTGATGGTGTGTGAAGCAGATGCCTTCATCAATAAGATTGGAGAAACTGAACATAAAAATGATGATATCAATGCTTATAGCATCAACGCTGACAGAGAAGGGACAGAGCTGAAACATTTTCTTCTAACGAGTCCATCATTCATAGGACATGCAAAGAAGCTCTTCAATCTTGATGTGGATCATCACAACACCCTAGAAAAGGATGAAACCATTTACAGCATGACAAACATGAGGCTTTACTTGGATTGCGCTTACGAACTGACAGAACGTAAGAGTCTTCAAGACTCCGAAGTCGTTCGTTCTCTCTTGCTGGCATGTGGGGGAAACTCAAGATTACGCATCTCCTTATGCAAGTTGGTGGAAGAAATCTGTGATGGCATTGAGAATCTGAAATTTTACAGAGAAGATTATGATTGTAGAGAGGAAGATTTTGCGTACAATGACACCTTTGCAATGATGGAGAAAGACATGAAGTGCAAGGAAGAGATAAATGGAATGTGGGAAAGTGGTTGGAGAACAGGCTTTTGTGCAGACGAGGCTCAACTGGTTGTCAATAAAATAGAAAGCCTGCTTATAGGTGGATTAATTGAGGACCTTGTGATCAATTTATTAGCTTAA 2376 0.3931 MYRSFLKCDDPKGVVGCGTIRKYRTRSHKVKDKTKMQKTSEIMETSLIYKRYKEEKNVAKECDGNLVGPSSLQLTKVSEEDHSLSNMLDSWSRDIICEGKSEDIAKGILKGALGLQDSLSMLRKLQEEAAQHTAPFGRKQTEKPERDRIDENKIGIRQANPLGEQSNTKGFQRPQLSAGGSSSNCKEELKKVIKESLVRQNMFPKTSDGFNSGSETFHISTSQCSGVKTDSLYDPSLSVIASRIGKGPSLVFKLMGLEEGPSKSFPAAKQKLLSGEIDKSKVRNNDSTAEKVNPELKVVRETLETTHFKGIFKENFVKDSKLHVHHHFNDTSSKQFVDLSHISPTEPQCTIYQQSEKSAYIPVLPKELTKLRREILSSKTIKHRKGSSSTNMGKGMEKGIRKRLKKEGEPKFLKEVIRVDAKGSSPVEEYAGKVKLYCHIGHTSHVNETIDRKWKVRPISRKQTEKDISQQTIVEEHQYKREIPSTKLRKLKSGSRIDKNEISCLKSRGSNNISTKKTTNSKDVKVENKKVNSEVDSLTGRKNQMKKQSPVAEPELAKLTVEQTRQREKKKNYPEIRISTRLEDELLMVCEADAFINKIGETEHKNDDINAYSINADREGTELKHFLLTSPSFIGHAKKLFNLDVDHHNTLEKDETIYSMTNMRLYLDCAYELTERKSLQDSEVVRSLLLACGGNSRLRISLCKLVEEICDGIENLKFYREDYDCREEDFAYNDTFAMMEKDMKCKEEINGMWESGWRTGFCADEAQLVVNKIESLLIGGLIEDLVINLLA 791
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g04702 791 MobiDBLite consensus disorder prediction 159 184 - -
Vimu11g04702 791 PANTHER OS01G0228800 PROTEIN-RELATED 1 789 - -
Vimu11g04702 791 Coils Coil 528 548 - -
Vimu11g04702 791 MobiDBLite consensus disorder prediction 138 154 - -
Vimu11g04702 791 MobiDBLite consensus disorder prediction 128 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g04702 Vimu-Chr11 67333736 67338361 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g04702 623 786 TRM (TON1 Recruiting Motif) Superfamily AT3G24630 32.749 2.00e-19 91.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g04702 - - var:108346558 1472.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g04702 11 67333736 67338361 Vimu11g04702 11 67333736 67338361 ECH
Vimu11g04702 11 67333736 67338361 Vimu8g01398 8 20294546 20298305 PCT