Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g04661 ATGGGTCGTCGTAAAATTGAAATTGCAGCAGTGAAGGATCCAAATACAAGACAAGTCACATTTTCAAAGCGTCGAACAGCCAAATTTCTTGAACACGAAATCATCAAATCAAATGATGTCAAACAAAACAACGTAGAAGTTGGTGACATTGGTAAGTTGAATCAACAACTGTTAGATATTGAAGCCCGAATACTTGTGGAGGAAAAGAAAGGCTTAGAGCTTGATGAGATACTAAAACAGCACCAACTGTCACAGCCTTCCCAATTTAAGCAATTACAAGATTCATATTTAGAATTCCAACGTAGGCTGAAAGATTACACTGATGCGATCGAGGTATCAGAATGTTTGATTCTACTTGCACAAGAACCCGTTGTCGAAATAACAAAACAGGTGAAGAAAAGAAGAAAGAATTGA 414 0.372 MGRRKIEIAAVKDPNTRQVTFSKRRTAKFLEHEIIKSNDVKQNNVEVGDIGKLNQQLLDIEARILVEEKKGLELDEILKQHQLSQPSQFKQLQDSYLEFQRRLKDYTDAIEVSECLILLAQEPVVEITKQVKKRRKN 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g04661 137 ProSiteProfiles MADS-box domain profile. 1 26 IPR002100 GO:0003677|GO:0046983
Vimu11g04661 137 Coils Coil 89 109 - -
Vimu11g04661 137 SUPERFAMILY SRF-like 1 26 IPR036879 GO:0003677|GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g04661 Vimu-Chr11 67061322 67061855 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g04661 1 29 Type I MADS-box Gene Family AT2G34440 72.414 1.47e-07 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g04661 - - gmx:100791127 158.688