Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g04637 ATGGCATTAAATCAAGAAATCATCTATTCTCATACAGTGCAAATCGCTGATATTGATCATGATGACCAGGTGGACATGTTCAACCTTTGGAGATACATAAGCACCGCAGAGGGTAAAAACGCCGCACACACCCGCATGCAAAAACGCAACTACAGAACCACGACCATCGCGCCGCACCTCGGACCGCCGCACACACTAAAAGCTAACAAAGCAGAGGAAGAGATGACTGAAAAAGTTGAAAACTTTTACAAAATGAAAGGTGGAGTTTGGGGGTGTGAATGCGAAGGGAAAGGGAGCAACCACCTCACTCACGCTGCTATCATCGGCCATGACGGCAGCGTTTGGGCTCAGAGCTCCAGCTTCCCTCAGGAACCATGGTTACTTCATGACTTTAACGAGGATTTCTACGGGGAAGAACTACGACTTGTTATAGTTGGTTACATACGTCCCGAGGCCAATTTTTCATTCCTTGAAAGCTTGGTAGCTAAAATTCAGGAAGATCGCGGAGTTGCTGAAAGGGCTCTTGATCTTCCCTTATTTTCAAGCTTTAAGAATGATTCATATCTGAGAAGCTCTTAG 579 0.4577 MALNQEIIYSHTVQIADIDHDDQVDMFNLWRYISTAEGKNAAHTRMQKRNYRTTTIAPHLGPPHTLKANKAEEEMTEKVENFYKMKGGVWGCECEGKGSNHLTHAAIIGHDGSVWAQSSSFPQEPWLLHDFNEDFYGEELRLVIVGYIRPEANFSFLESLVAKIQEDRGVAERALDLPLFSSFKNDSYLRSS 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g04637 192 Pfam Riboflavin kinase 77 174 IPR015865 GO:0008531|GO:0009231
Vimu11g04637 192 PANTHER RIBOFLAVIN KINASE/FMN ADENYLYLTRANSFERASE 124 191 IPR023468 -
Vimu11g04637 192 SMART Flavokinase_2 59 176 IPR015865 GO:0008531|GO:0009231
Vimu11g04637 192 SUPERFAMILY Riboflavin kinase-like 82 189 IPR023465 GO:0008531|GO:0009231
Vimu11g04637 192 Gene3D - 59 192 IPR023465 GO:0008531|GO:0009231
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g04637 Vimu-Chr11 66920889 66923431 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g04637 92 187 Cytoskeleton Gene Families AT4G29350 41.237 6.31e-12 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g04637 K20884 - gmx:100811525 130.568