Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g04611 ATGTCCGCTAATCCAGTAATACTGCAGAGTGAGAAGTTGACCAAGTATATACTGGAGACTAGCGTTTACCCTCGAGAAGCCGAGACTCTCGAAGAGCTAAGGAATGCCACCGCAACACACCCTTGGGGATTTATGGGCGCTGATCCTGATGCGGGTCAGCTAATGGCCTTGCTCTTGAAGCTGTTGAATGCTAAAAAGACCATTGAAGTGGGAGTTTTTACAGGATACTCTCTTCTCCTCACTGCACTAACCATTCCAGATGATGGAAAGATTATAGCCCTGGATCCAGATAGAGAAGCTTATGAGATAGGACTACCATTCATTAAGAAGGCTGGTGTAGAGCACAAGATCGACTTCATTCAGTCTCCAGCTCTACCTGTTCTTGATAAACTATTAGACGACGATTCATACAAGGATAGTTTTGAGTTTGCCTTCGTTGATGCTGATAAAGATAACTACTGGAATTACCACAAGCGGCTTCTCAAACTGGTGAAGATTGGTGGGTTAATAATCTATGATAACACCCTCTGGGGTGGAACTGTTGCCTGGCCTGAAGAGGATGTTCCAATACCCAAAAGAAAAATCAGACAGGCTATTGTAGCTTTCAACAAAGCAATAGCAGATGATTCTCGTGTTGAAATTTCTGTTGTTTCAGTTGGTGATGGCTTAACTGTTTGCAGGCGTGTTCAATGA 693 0.4358 MSANPVILQSEKLTKYILETSVYPREAETLEELRNATATHPWGFMGADPDAGQLMALLLKLLNAKKTIEVGVFTGYSLLLTALTIPDDGKIIALDPDREAYEIGLPFIKKAGVEHKIDFIQSPALPVLDKLLDDDSYKDSFEFAFVDADKDNYWNYHKRLLKLVKIGGLIIYDNTLWGGTVAWPEEDVPIPKRKIRQAIVAFNKAIADDSRVEISVVSVGDGLTVCRRVQ 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g04611 230 PANTHER O-METHYLTRANSFERASE-RELATED 4 229 - -
Vimu11g04611 230 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 6 229 IPR002935 GO:0008171
Vimu11g04611 230 Gene3D Vaccinia Virus protein VP39 2 230 IPR029063 -
Vimu11g04611 230 Pfam O-methyltransferase 19 229 IPR002935 GO:0008171
Vimu11g04611 230 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 10 228 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g04611 Vimu-Chr11 66764952 66766413 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g04611 7 229 Monolignol Biosynthesis Gene Families AT4G26220 62.780 4.10e-106 304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g04611 K00588 - gmx:100792717 392.504