Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g04610 ATGGAGAACATATCTGAGCCAAAAGTGTTCGCAAATACAGTCATATTGCAGAGTGAGGGATTACTAAAGTATATATTGGAGACTGGCGTTTATCCACGAGAAGCAGAGACCCTCAAAGAGCTAAGAAATGCAACTGCGAAGCATCCCATGGGTTTCATGGGTGCTGCACCTGATGCGGGTCAGCTAATGGCCATGCTCTTGAAGGTTTCGAATGCTAAAAGGACCATAGAAGTTGGAGTTTTCACTGGATACTCTCTTCTCCTCACTGCACTCACAATTCCAGATGATGGAAAAATTATAGCGATGGATCCAGACAGAAAAGCTTATGAGATAGGGCTACCATTCATTAAAAGGGCTGGTGTTGAACACAAGATCGACTTCATAGAGTCTCCAGCTTTACCAGTTCTTGATAAGCTCATAGAAGATGCTGGAAATGAGGGGAGTTTTGACTTTGCATTCATTGATGCTGACAAAAAGAATTACTGGAATTACCACGAGAGAGTTATGAGACTGGTGAAGATTGGTGGAATAGTTGCGTATGATAACGCACTGTGGGGAGGAACTGTTGCCTTGCCTGAAAAGGCAGTTTCGAAGGATAAACGAGAGTGGAGACTGTTATCACTTGCTTTCAACGAAGCAATTTCAAAGGATTGTCGTGTTGAAATTGCTTTTGTTTCAATCGGTGATGGAGTCATTATCTGCAGGCGTATTGCTTGA 717 0.4282 MENISEPKVFANTVILQSEGLLKYILETGVYPREAETLKELRNATAKHPMGFMGAAPDAGQLMAMLLKVSNAKRTIEVGVFTGYSLLLTALTIPDDGKIIAMDPDRKAYEIGLPFIKRAGVEHKIDFIESPALPVLDKLIEDAGNEGSFDFAFIDADKKNYWNYHERVMRLVKIGGIVAYDNALWGGTVALPEKAVSKDKREWRLLSLAFNEAISKDCRVEIAFVSIGDGVIICRRIA 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g04610 238 PANTHER O-METHYLTRANSFERASE-RELATED 12 237 - -
Vimu11g04610 238 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 14 237 IPR002935 GO:0008171
Vimu11g04610 238 Gene3D Vaccinia Virus protein VP39 5 238 IPR029063 -
Vimu11g04610 238 Pfam O-methyltransferase 30 237 IPR002935 GO:0008171
Vimu11g04610 238 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 18 236 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g04610 Vimu-Chr11 66762412 66763698 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g04610 15 237 Monolignol Biosynthesis Gene Families AT4G26220 62.780 1.40e-105 303
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g04610 K00588 - gmx:100795229 409.068
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g04610 11 66762412 66763698 Vimu11g04610 11 66762412 66763698 ECH