Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g04598 ATGAGGTTAACATCACCTGCGATTCTCAACCTTCTCTTTCTATGTGATCTCCTTCTTTGTCTTCCCACATTTTCTTTCTCTCTCCTCGCTGCTGACGCCAAGTCGGAGCCGCAGCTTCTCCTCGCCGGGAAAAACGCAACCTCTGTCGTCAATGCCTCGCTTGGGAGATCCGGCGATGATAGCTTCGCGAACATGATTGATCGGGCTCTCGAAAGAGAGTTCCCCGAGAATGAGCAGAATGAAGGTACCGATCCTGGTGGTTTCAACAACAGTGTTGCTGAACAGCAGGCTGTCTTGGAAACTGTTGCCAGAGTTATGCCCAAGAAAAATGAAAGCAAAGAAGAAAAGCCATTTCAGTTCCACGATGTTTTCAACTTAGACAATGAGAATAGAGCAGACGATATGCCAACTTTAATTGATCGGAAGGACAATGTCTTTATCATATCCAATCCCAAGTCAAAGTATCCAGTTCTCCAATTAGACTTGAGATTGATATCAGATCTTGTGGTTGTCATTGTATCTGCAACCTGTGGCGGCATTGCCTTTGCTTCTGCTGGACAACCAGTGATGACTGGATATCTGCTAGCGGGATCAATCATTGGACCAGGAGGTTTGAGTTTTGTTAGTGAAATGGTCCAAGTTGAGACCGTTGCTCAATTTGGTGTCATCTTTTTGCTCTTTGCATTGGGCTTAGAGTTTTCAGCAACGAAGCTTCGAGTTGTTCGAGCGGTGGCTATCCTTGGAGGCCTACTCCAAATTTTCTTATTTATGTGCTTGTGTGGAATAACAGCTTCATTATGTGGTGGTAAATCATCTGAAGGAATATTTGTAGGTGCATTTCTATCCATGTCTTCAACAGCTGTGGTCTTGAAATTCTTAATGGAAAGGAATAGCGTCAATGCCCTTCATGGTCAGGTTACAATTGGAACTCTGATACTGCAGGATTGTGCCGTTGGTTTGCTCTTTGCACTGCTTCCTGTTTTGGGTGGAACATCAGGTGTTCTTCAAGGAGTAGTATCCATGGCTAAGTCATTGGTGACCTTAATTGCATTTTTGGCCATTTTGACAATATTATCTCGTACTTGTGTACCATGGTTCCTTAAGCTAATGATAAGTTTATCCTCTCAGACGAATGAACTTTATCAATTGGCATCAGTGGCTTTCTGCCTACTTGTTGCTTGGTGTAGTGATAAGCTGGGTTTAAGTCTTGAACTAGGTTCCTTTGCTGCGGGAGTGATGATATCAACAACAGATCTTGGTCAGCATACACTTGAACAAGTTGAGCCAATTCGCAATTTTTTTGCTGCTCTGTTCTTGGCCAGCATTGGGATGCTTATACATGTCCATTTCCTTTGGAATCATGTTGACATTTTACTGGCAGCTGTTATATTGGTGATCATCATAAAAACAATTGTAGCTGCATCTGTTGTTAAGGGGTTTGGATACAGCAACAAGACTTCACTTCTTGTTGGGATGTCCCTGGCACAAATTGGCGAATTTGCCTTTGTTCTTCTCAGCCGTGCTTCAAATCTTCATTTAGTTGAGGGAAAGTTGTATCTATTGCTCCTGGGAACAACAGCTCTTAGTTTGGTGACTACACCTTTACTCTTCAAGCTAATTCCTGCAGTTGTGCATCTTGGGGCATTGTTGCGGTGGTTCCCTCCTGATAGTTCAACTGAGATTGCATTTAAAGGGGATAGCTTCCGTGTAGACAGTGCTAAGCGTATTACTTTGATGGTTCAAGGCTCTCATGATTCGTGA 1761 0.4327 MRLTSPAILNLLFLCDLLLCLPTFSFSLLAADAKSEPQLLLAGKNATSVVNASLGRSGDDSFANMIDRALEREFPENEQNEGTDPGGFNNSVAEQQAVLETVARVMPKKNESKEEKPFQFHDVFNLDNENRADDMPTLIDRKDNVFIISNPKSKYPVLQLDLRLISDLVVVIVSATCGGIAFASAGQPVMTGYLLAGSIIGPGGLSFVSEMVQVETVAQFGVIFLLFALGLEFSATKLRVVRAVAILGGLLQIFLFMCLCGITASLCGGKSSEGIFVGAFLSMSSTAVVLKFLMERNSVNALHGQVTIGTLILQDCAVGLLFALLPVLGGTSGVLQGVVSMAKSLVTLIAFLAILTILSRTCVPWFLKLMISLSSQTNELYQLASVAFCLLVAWCSDKLGLSLELGSFAAGVMISTTDLGQHTLEQVEPIRNFFAALFLASIGMLIHVHFLWNHVDILLAAVILVIIIKTIVAASVVKGFGYSNKTSLLVGMSLAQIGEFAFVLLSRASNLHLVEGKLYLLLLGTTALSLVTTPLLFKLIPAVVHLGALLRWFPPDSSTEIAFKGDSFRVDSAKRITLMVQGSHDS 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g04598 586 Gene3D - 162 545 IPR038770 -
Vimu11g04598 586 Pfam Sodium/hydrogen exchanger family 169 538 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Vimu11g04598 586 PANTHER POTASSIUM/PROTON ANTIPORTER-RELATED 31 577 IPR045158 GO:0015386|GO:0071805|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g04598 Vimu-Chr11 66656581 66664486 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g04598 51 586 Antiporters AT2G19600 85.714 0.0 896
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g04598 K26735 - gmx:100788884 996.882
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g04598 11 66656581 66664486 Vimu11g04598 11 66656581 66664486 ECH