Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g04487 ATGAACGACGCAGATGTCTCCAGGCAAATCCAGCAGATGGTGCGGTTCATCCGCCAGGAAGCAGAGGAAAAAGCCAACGAGATCTCTGTCTCCGCCGAAGAGGAATTCAATATCGAGAAGCTGCAGTTAGTTGAAGCCGAGAAGAAGAAGATCAGACAAGAGTACGAACGCAAAGAGCGCCAAGTGGAAATTCGCAAGAAGATGATTGTTCGTCAGCTGACATTGCTTGAAATCAAATTCTGGAGACCAAGTCTTACTCGTTTAGATCTTGATCCTTGCTTTGAGTACTCGATGCAGCTGAATGCTTCTCGAATTAAAGTTCTTCAAGCTCAGGATGACGTGATCAGTTCCATGAAAGAAGCTGCATCCAAGGAACTTTTGAGTGTGAGTCATCATCATGATTTGACTTTTACTCATCATGATCATGTGTACAGAAACCTTCTTAAAGATCTCATTGTTCAGTGTTTGCTAAGACTGAAAGAACCTTCTGTCTTATTGAGATGTCGGAAAGAGGATCTGCACTTGGTAGAGCATGTGCTGGATTCTGCTGCACAGGAGTATGCCGACAAAGCAAATGTTGATCCTCCAGAGATCATTGTTGACAATCAAGTTTATCTTCCTCCTGGACCCAATCATCATAATGCTCATGATATCTACTGTTCTGGTGGCGTGGTGCTAGCTTCTCGTGATGGAAAGATTGTGTGTGAAAATACTCTTGATGCACGACTTGATGTAGTGTTTCGTAAAAAGCTCCCTGAGGTAAGTTTTTTGTGCATAGTAATTCTTATTCTGTGA 795 0.4289 MNDADVSRQIQQMVRFIRQEAEEKANEISVSAEEEFNIEKLQLVEAEKKKIRQEYERKERQVEIRKKMIVRQLTLLEIKFWRPSLTRLDLDPCFEYSMQLNASRIKVLQAQDDVISSMKEAASKELLSVSHHHDLTFTHHDHVYRNLLKDLIVQCLLRLKEPSVLLRCRKEDLHLVEHVLDSAAQEYADKANVDPPEIIVDNQVYLPPGPNHHNAHDIYCSGGVVLASRDGKIVCENTLDARLDVVFRKKLPEVSFLCIVILIL 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g04487 264 Gene3D - 118 257 IPR038495 -
Vimu11g04487 264 PANTHER ATPASE H+-TRANSPORTING V1 SUBUNIT E1A-RELATED 95 255 IPR002842 GO:0033178|GO:0046961|GO:1902600
Vimu11g04487 264 SUPERFAMILY V-type ATPase subunit E-like 113 255 - -
Vimu11g04487 264 Pfam ATP synthase (E/31 kDa) subunit 95 255 IPR002842 GO:0033178|GO:0046961|GO:1902600
Vimu11g04487 264 Pfam ATP synthase (E/31 kDa) subunit 16 69 IPR002842 GO:0033178|GO:0046961|GO:1902600
Vimu11g04487 264 Coils Coil 38 68 - -
Vimu11g04487 264 Hamap V-type proton ATPase subunit E [atpE]. 8 257 IPR002842 GO:0033178|GO:0046961|GO:1902600
Vimu11g04487 264 Gene3D - 1 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g04487 Vimu-Chr11 65882698 65885499 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g04487 1 252 Primary Pumps ATPases(2) AT4G11150 65.873 3.66e-113 323
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g04487 K02150 - gmx:106794127 410.223
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g04487 11 65882698 65885499 Vimu11g04487 11 65882698 65885499 ECH