Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g04473 ATGAGCTCAGATGCGAGTAGAGAACGAGGTGCATCAGACGTGGTACAGCGGAAATTTCAATGTAGAACACTTTTGTTTTTGGCATACCAAAGTTTTGGCTTTTTGTTTGGTGACTTGAGCCTATCCCCACTTTATGTCTATCAAAGTATTTTTTCTGGAAGACTAAAACAAGTCCAGAATGAAGATGCAATATTTGGCGCATTTTCTTTGATATTTTGGACTCTTTCAATTGTTTCTTTATTGAAGTATTCAGTTATTCTTTTAAGTGTAGATGATAATGGCGAAGGGGGAATTGTTGCTTTGTATTCACAGCTTTGCAGAAATGCAAAATTTTGTTTGCTTCCTAATCATCAAGCTTCTGATGAGGAGCTTTCTACATATCTCAAACTTGGTTCCTCAAATAGAAGTATACCACCATCTCCTTTGAAAAGATTCATTGAGAAACACAAGAGTACAAAGAAGGCTTTGCTTATTTTTGTTTTACTGGGTGCTTGCATGGTAATTTGTGTTGGTGCACTCATGCCTGCCATTTCTGTTCTTTCATCCATTAAAGGCCTGGAAATTGGAGCAAAGATTACAAACAAAAGTGTGCTGTCTCGTATTTCCTGTGTTCTAGTGATTGGACTCTTTGTTATGCAACACCGTGGCTCCTACAAGGTTGCATTTGTATTTCCTCCCATAATCATTCTATGGTTACTTACTATTTTTATGATTGGCATTTACAATGTCATCAAGTGGAACCCACGAGTATATGGGGCTCTTTCTCCGCACTATATTTACAAGTTCTTTAGGCTAACAGGAAAAGGTGGTTGGGTTAATCTTGGAGGAGTATTTCTGTGTGTTACAGGAACTGAAGCTATGTTTGGAGACCTCGGTTACTACAGACAAATACCTTTGAGGGTATGTGTGGCCAATAAGGATGTCATTTTTGATGAAACAAGGATGGCGATGCACCCGGAAAACTCTGGAAGTGAGAAGAAGATTCTCGTGGAGGTGGAGCATACTACTAATGGAGCTGGCACGGCCGGTGGGACTGAGGAAAACCAAACGGGTGAAGGGCAAGTTGAAACCGGTCGGACGATAGCTGAGAACCGACCGGATGAATTTCGAACAGACCTTGGTGATGACATAGATGATACGTCTGGCGAGGGAAGTCATGGAAAAGCTGCTGGTGTTGATTTGAGAAACTATCAGCTTGTTCTAGTATTCAAAACCCAGCAGGAAGGACCCGATTGGGCAAACAAGTTCAAAACAATGGGAAGATCGAAGCTTCAAACTCACATTCGAAAATTTCAAGCTTCCGCAACGCGTCACTTAGATGAACCCATGGAAAAATATGAGAATGCTGTCAATCTAGTTGCATTTTATTGTGTCATTTACCCATGTTTAATTCTTCAATACATGGGGCAGGCTGCTTTTCTTTCCAAGAATTTATCTGCAGTGCATATAAGCTTTTATGCTTCTATTCCAGATGTTCTATTTTGGCCAGTATTTGTGGTGTCTGCTTTGGCGGCAGTAGTTTCAAGTCAGGCTGTCATTGCTTCAGCATTCTCAACAGTCCAACAATGTTATGCATTTGAATGTTTCCCTCGAGTTAAGGCAGTGCATTCCAGAAGGTGGATCCCTGGTCAGGCATATATACCGGAGATAAACTGGATTCTTATGATAATAAGCTTGGCTGTGACAGTTGGTTTAGGAGACATAAACAGAATAGGACATGCTTATGGGATTGCACATCTGATTCTTGTGTTTGTGACCACATGTTTGACATCACTAGCCATCATCCTTGTATGGAATCGAAGTCTTATAATTGCTCTGGCGTTTGCTTTATCCTTTGGTTCGATAGAGATTCTCTTCCTGTCATCATATAGCCTGAAAATCCTTAAAGGTGGCTGGATTCCTCTTCTGCTTTCTGCAGTCTTCATGGTTGTAATGTATGCGTGGCATTATGGTTCCAGGAAAAGGTATTTATTTGACACGCATAACAAAGTTTCAACGAGGACCATCCTTGCATTAGGTCCTAGTCTTGGGATTGTTAGAGTTCCTGGAATGGGCCTTATCTACACTGGATTGGCTACTGGAATCCCTGCCAGTTTTACTCATTTCTTGACAAATCTGCCAGCTTTCTACCAAGTGGTTGTTTTTGTTTGTGTTAAGACTGTACCTGTGGCTTGGGTGCCACGTGAGGAACGTTACCTCATCGGTCGAATTGGTCCCAAATCTTACCGGTTGTATCGATGCATTGTCCGAAATGGTTATAAAGATGTGTGCAATGACGAAAATGATTTTGAAAATGAACTGGTGATGAGCATAGCTGAATTCATTCAATTGGAAGCAGAAGGTTGCTCTGGTAAGGCAGAAGGTTCAGCGGATGGACGGATGGCGGTGGTGAGAACATCAGGGAAGTTTGGGACACGATTGCTGATGTCGGAATCTTCTGCTTTTCAGGAAGGCAACAATATTAATCTTCCGGGAGCTTTGACCGTTACTAGCAGTAAATCTCCAATATTGAAGAGGCTGCGGGCCATGTATGAGCGGGAATCGCCTGAACACATCGCTAGACGACGAATTCGGTTTGAGTTGCAAAATGTAATATATTATGACCCACGGGTCAAGGAAGAACTCATGGAGCTGGTAGAAGCCAAGTGCACTGGAGCAGCGTATGTAATTGGGCATTCTAACGTGAAGGCCAACTGGAACTCATCATTTATAAAGAAGTTTGCTATCGACCTCTACTCTTTTCTCCGGAAAAATTGTCGGGCCCCAGTTGTAGGACTAAACATTCCTTCGATTTCTCTGATTAAGGTAGGAATGAATTACCATGTGTAG 2829 0.4189 MSSDASRERGASDVVQRKFQCRTLLFLAYQSFGFLFGDLSLSPLYVYQSIFSGRLKQVQNEDAIFGAFSLIFWTLSIVSLLKYSVILLSVDDNGEGGIVALYSQLCRNAKFCLLPNHQASDEELSTYLKLGSSNRSIPPSPLKRFIEKHKSTKKALLIFVLLGACMVICVGALMPAISVLSSIKGLEIGAKITNKSVLSRISCVLVIGLFVMQHRGSYKVAFVFPPIIILWLLTIFMIGIYNVIKWNPRVYGALSPHYIYKFFRLTGKGGWVNLGGVFLCVTGTEAMFGDLGYYRQIPLRVCVANKDVIFDETRMAMHPENSGSEKKILVEVEHTTNGAGTAGGTEENQTGEGQVETGRTIAENRPDEFRTDLGDDIDDTSGEGSHGKAAGVDLRNYQLVLVFKTQQEGPDWANKFKTMGRSKLQTHIRKFQASATRHLDEPMEKYENAVNLVAFYCVIYPCLILQYMGQAAFLSKNLSAVHISFYASIPDVLFWPVFVVSALAAVVSSQAVIASAFSTVQQCYAFECFPRVKAVHSRRWIPGQAYIPEINWILMIISLAVTVGLGDINRIGHAYGIAHLILVFVTTCLTSLAIILVWNRSLIIALAFALSFGSIEILFLSSYSLKILKGGWIPLLLSAVFMVVMYAWHYGSRKRYLFDTHNKVSTRTILALGPSLGIVRVPGMGLIYTGLATGIPASFTHFLTNLPAFYQVVVFVCVKTVPVAWVPREERYLIGRIGPKSYRLYRCIVRNGYKDVCNDENDFENELVMSIAEFIQLEAEGCSGKAEGSADGRMAVVRTSGKFGTRLLMSESSAFQEGNNINLPGALTVTSSKSPILKRLRAMYERESPEHIARRRIRFELQNVIYYDPRVKEELMELVEAKCTGAAYVIGHSNVKANWNSSFIKKFAIDLYSFLRKNCRAPVVGLNIPSISLIKVGMNYHV 942
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g04473 942 MobiDBLite consensus disorder prediction 338 357 - -
Vimu11g04473 942 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 453 941 IPR003855 GO:0015079|GO:0016020|GO:0071805
Vimu11g04473 942 MobiDBLite consensus disorder prediction 337 358 - -
Vimu11g04473 942 Pfam K+ potassium transporter 29 302 IPR003855 GO:0015079|GO:0016020|GO:0071805
Vimu11g04473 942 Pfam K+ potassium transporter 453 755 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g04473 Vimu-Chr11 65789773 65802898 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g04473 454 942 Inorganic Solute Cotransporters AT4G23640 60.692 0.0 595
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g04473 K03549 - gmx:100777998 805.823
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g04473 11 65789773 65802898 Vimu11g04473 11 65789773 65802898 ECH