Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g04423 ATGGAGGCATCAACGGCTTTAATGTTCCTATCTGCAATAGCGGCCTATTTAATATGGTTCACCTTCGTAACTCGCTCCCTCAAAGGTCCACGTGTCTGGCCCCTATTAGGCAGCCTCCCCGGTCTCATCCAACATGCCAACCGCATGCATGACTGGATCGCTGACAACCTACGCGCCTGCGGCGGCACCTACCAAACCTGCATCTGCGCCCTCCCCTTCCTCGCACGCAAACAGTGCCTCGTCACTGTCACCTGTGACCCCAAGAACCTCGAGCACATCCTCAAGCTCCGCTTCGACAACTACCCCAAGGGCCCCACCTGGCAGTCAGCCTTCCATGATTTGCTCGGTCAGGGCATCTTCAACTCCGACGGAGACACCTGGCTCTTTCAGCGCAAAACAGCGGCGCTCGAATTCACCACGCGCACCCTTCGCCAGGCCATGGCGCGTTGGGTCAACCGAGCCATTAAGCACAGGTTCTGTCCCATCCTCGCCGCGGCTCAGCAAGACAACAAATCGGTCGATCTCCAAGACCTCTTGCTTCGCCTCACTTTCGACAACATATGCGGCCTGGCTTTCGGGCAGGACCCTCAGACTCTGGCCGCTGGCCTCCCTGATAACGCTTTCTCTATTTCCTTTGACAGCGCCACCGAAGCCACTTTACAACGCTTCATTCTCCCGGAGATTCTTTGGAAGCTCAAGCGATGGCTCCGCCTCGGCATGGAAGTCAGCCTTAGCCGAAGCCTCAAACACATCGACCAGTACCTCTCCAGCATCATCAAGAACCGTAAACTCGAACTCGTCAACGGCACTGGCTCCCACCACGACGACCTCTTGTCTCGTTTCATGAGGAAAAAGGAAACCTACTCGGACGAGTTCCTCCAGCACGTGGCACTCAACTTCATCCTTGCCGGACGCGATACGTCATCGGTGGCCCTCAGCTGGTTCTTCTGGCTCTGTATCAAGAACCCGCACGTGGAGGAAAACATCCTTCGAGAACTCTGCACTGTTCTGCTCTCCACTCGTGGAGAAGACATCTCAACCTGGCTGGAAGAACCTCTCGTGTTCGACGAGGTAGACCGTCTCGTCTATCTCAAAGCTGCCTTGTCCGAGACCCTGCGACTTTACCCTTCCGTCCCTGAAGACTCCAAACATGTCGTTGAGGACGATGTTCTCCCCAACGGGACTTTCGTTCCGGCGGGGTCCTCCGTGACGTATTCCATTTACTCCGTTGGGAGGATGAAGTTCGTATGGGGAGAGGATTGCCTCGAGTTCAAGCCAGAGCGGTGGCTCTCTCCCGAAGGGGACAGAATTCAGGTTCAAGACTCTTACAAGTTTGTTTCCTTCAATGCGGGACCGAGGCTTTGTTTGGGGAAGGACCTGGCTTACTTGCAGATGAAGTCCATCGCGGCGGCGGTGCTACTGCGCCACCGCCTCGCAGTCGCGGCGGGCCACCGCGTGGAGCAGAAGATGTCGCTCACGCTCTTCATGAAGTACGGTCTGAAGGTGAACGTGTGCCCTAGGGATCTGAAACCGGTGCTGGAAAAGATAAAAAAGACCGAAGGTGTCGATGTCGGTCAAAAGTGA 1584 0.5593 MEASTALMFLSAIAAYLIWFTFVTRSLKGPRVWPLLGSLPGLIQHANRMHDWIADNLRACGGTYQTCICALPFLARKQCLVTVTCDPKNLEHILKLRFDNYPKGPTWQSAFHDLLGQGIFNSDGDTWLFQRKTAALEFTTRTLRQAMARWVNRAIKHRFCPILAAAQQDNKSVDLQDLLLRLTFDNICGLAFGQDPQTLAAGLPDNAFSISFDSATEATLQRFILPEILWKLKRWLRLGMEVSLSRSLKHIDQYLSSIIKNRKLELVNGTGSHHDDLLSRFMRKKETYSDEFLQHVALNFILAGRDTSSVALSWFFWLCIKNPHVEENILRELCTVLLSTRGEDISTWLEEPLVFDEVDRLVYLKAALSETLRLYPSVPEDSKHVVEDDVLPNGTFVPAGSSVTYSIYSVGRMKFVWGEDCLEFKPERWLSPEGDRIQVQDSYKFVSFNAGPRLCLGKDLAYLQMKSIAAAVLLRHRLAVAAGHRVEQKMSLTLFMKYGLKVNVCPRDLKPVLEKIKKTEGVDVGQK 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g04423 527 CDD CYP86A 67 500 - -
Vimu11g04423 527 PRINTS E-class P450 group I signature 445 455 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g04423 527 PRINTS E-class P450 group I signature 365 383 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g04423 527 PRINTS E-class P450 group I signature 292 309 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g04423 527 PRINTS E-class P450 group I signature 455 478 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g04423 527 PRINTS E-class P450 group I signature 312 338 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g04423 527 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 448 457 IPR017972 GO:0005506|GO:0016705
Vimu11g04423 527 PANTHER CYTOCHROME P450 19 502 - -
Vimu11g04423 527 SUPERFAMILY Cytochrome P450 20 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g04423 527 FunFam Cytochrome P450 21 510 - -
Vimu11g04423 527 Gene3D Cytochrome P450 23 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g04423 527 PRINTS P450 superfamily signature 455 466 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g04423 527 PRINTS P450 superfamily signature 446 455 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g04423 527 PRINTS P450 superfamily signature 366 377 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g04423 527 PRINTS P450 superfamily signature 303 320 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g04423 527 Pfam Cytochrome P450 28 495 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g04423 Vimu-Chr11 65331398 65333689 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g04423 1 518 Cytochrome P450 AT2G45970 75.048 0.0 825
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g04423 K15398 - gmx:121174913 999.964
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g04423 11 65331398 65333689 Vimu11g04423 11 65331398 65333689 ECH