Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g04415 ATGGTGAATGATGAGGTAGCAGATTGGGAAAATGAAGTAAAAAAGATGATTGTTGATCACAGGTTTGTCAATACACATTATCAAGGCAAAGATGGAGCAGGCTGCCAGCCTAATCAATTCCTGGATGCTTTACAGATTTTATATACAAACAAGGAACTTTTCATTAAACTTCTGCAAGATCCAAACTCTTTGTTAGTAAAACAGATTCAGGAATTACAGAGTTCTCAAGTGAAAGAACCATGCCAGCATGCAAGGCAGAAAATGATGAGTAGATTAAATAAGCCTCAAAATACTGATGCTACACAATGTGCAAAACCTTTTAATTCCTCTGATAGATCTGATTTGAGGTCAAACAGAATAGTAGTTTTGAAGCCTGGCACAGTTAATGTGGAAAATTCTGTAGAAACAAGCTTTGTAAGTCCTCCACATTCGCCTGATAGCTTCAGTTCTAATGCACAAAATACTAGGCTTTCACATTTTCCCTTCAGTTGTATAAAGAGAACATTGAAGCATGTTATGAAAGTAAGGAGACAAGAACAGCAGTTGAAGACAGCTGATGGAATACCAAGTAGACTTTCCTCCAGTTCAAAGGGCCTGGGAGATCGAAAAAAAGCAAAAGAATTGGAAATTTCTGAAAGAAACTCACCAATTCATGCCCTTGGTAATACTGGAAAATGGTTGAATTCATATAATGATTTGAAGAAGAAGAGGGAGAACATTATCATGTTCAAGGATTCTGCGTTATGTATGGGGCAGGAAGCAGCTTCTTTTGGTGAAAGTTGCAGTAAGAATACTTCAGTTAGCCCTCGTGAAGAAAATATATTGAAAATGCACGTTGAAAGTAGGAAGAGTCGATCTCAGATGTTGAACTGTGGAATTGAGGAAACTTTTGAAGAAGACATTAATTTTCAAAATAGTGTTCTTAGCCACAATCTGCATGCATATTATGATATTCCTAGAGATGAGTCACCAGAAAAGAGAATGCATGAAAAAATTGAAGAGAACCATTTTGAAGACCTTTTAAGACTCTCTTTTGATCCAATGAACGATTTAGTCTCCTCCAAGGACGACATCATAGACTATGTAAGGGAAATTCTGCATGCTTTGAACCTTACTCTGAAGAGATCATCTGACGAATTGCTGGATCCATCCACCTTTGTTGAACTGAAGGAAAAACCTAGCCAACTTTCTGGTCGAACAATCTTGCATGACTGTGTCATAGAATGTTTCATGCAGGTATACCAGAATAGTGTTTTCCCACTTCACGTTGGAAACGTCCAAGAGTATGTTTTGAAGAAACTTTTGGTTAAAGAGATCACTGAACTCGTTAACTTGCACTTTCACTCTCATCCATCAACTTTAACGTTAGAACAGCTTGTTGAAAAGGACTTGGCAAGACGTGGTTCATGGCTAAATATCCAAGTTGATGCAGAAGATATTGCATTAGAGCTGGAGAAACATGTTCTTGAAAAACTGGTATTGGAAATTGCGTCTGAGATGAATTATCAGAAACATTACACATTGCAATAA 1530 0.3732 MVNDEVADWENEVKKMIVDHRFVNTHYQGKDGAGCQPNQFLDALQILYTNKELFIKLLQDPNSLLVKQIQELQSSQVKEPCQHARQKMMSRLNKPQNTDATQCAKPFNSSDRSDLRSNRIVVLKPGTVNVENSVETSFVSPPHSPDSFSSNAQNTRLSHFPFSCIKRTLKHVMKVRRQEQQLKTADGIPSRLSSSSKGLGDRKKAKELEISERNSPIHALGNTGKWLNSYNDLKKKRENIIMFKDSALCMGQEAASFGESCSKNTSVSPREENILKMHVESRKSRSQMLNCGIEETFEEDINFQNSVLSHNLHAYYDIPRDESPEKRMHEKIEENHFEDLLRLSFDPMNDLVSSKDDIIDYVREILHALNLTLKRSSDELLDPSTFVELKEKPSQLSGRTILHDCVIECFMQVYQNSVFPLHVGNVQEYVLKKLLVKEITELVNLHFHSHPSTLTLEQLVEKDLARRGSWLNIQVDAEDIALELEKHVLEKLVLEIASEMNYQKHYTLQ 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g04415 509 MobiDBLite consensus disorder prediction 180 210 - -
Vimu11g04415 509 PANTHER ADHESIN-LIKE PROTEIN, PUTATIVE (DUF3741)-RELATED 11 294 - -
Vimu11g04415 509 Pfam Protein of unknown function (DUF3741) 20 63 IPR022212 -
Vimu11g04415 509 Pfam Domain of unknown function (DUF4378) 360 495 IPR025486 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g04415 Vimu-Chr11 65277225 65281936 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g04415 349 483 TRM (TON1 Recruiting Motif) Superfamily AT4G00440 30.612 1.88e-10 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g04415 - - vra:106768413 621.698