Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g04400 ATGGTGTTGAGTGGTGAAGCAACTGTGAGAGAGAAAGAAAAGATGAAGCTGAAGGTTTATGCAGATCGAATGTCGCAGCCATCCCGTGCGATTCTCATATTCTGCAAAGTGAATGGAATAGATTTTGAGGAGATCAAAGTCGATTTATCCAAACGTCAGCACTTATCTCCCGAATTCCAAGCAATTAACCCTTTAAGGAAAGTCCCTGCAATTGTTGATGGAAGGTTCAAGCTATTTGAGAGTTATCAAAACATTCCGTGCTTATGGAGTGTGGAACTATCTTCATTTTTGTTAAAGGTCATGCAATTCTCATATATCTTGCATCTGCGTTTCCGGGAGTTGCAGACCATTGATATGTGGATGTACAGAAGCAGGTTGGTTGTTTATGTGTTTCGTTGGCTAAGTGCTGCATGTGTTTCGCAGTTTGTATGTGATAAGGGATCGTACCCAGCCGATCTTTCCAGGAGAGCAAGAATTCACTCCGTGTTAGATTGGCATCATCAGAATTTGCGGCGTGGGGCAGGGCCAGCGTTGGGTCTACCACTGAACCAACAAGCAGCTGCTGAAGCTGAGAAAATTTTGATTTCCTCTTTGACTAAAATAGAAAACATTTGGCTTAAGGGGGACGGAAAGTACTTGCTTGGTGGCTTACGCCCATCCATAGCAGATCTCAGTCTGCTTTTAAATGGGAAGGACCGTGATCGTATCCTTGGCCCGCACAAGAAAGTTCAGCAGTGGATAGAGAGCACAAGAAATGCAACGAGACCTCACTTTGATGAAGTTCATAAAATCCTCTATAGGCTCAAAACGAAGCTTTCTGAGCAGCAATCTAATCAGGCAGATAGCATACAATCGTTCCTCCTAAATGCAGATTTGACGTTACACTTATTAGGGTATGTTTGGAAGCATGTTAGAACTCAGTTGAATGGAAATTTTTCAGTTTTTGATGCTCAAACTGAGAAGGAAGTGGAGGTGCTTCCCAAACTTGTAATCGATGATGGTGGAAAAGCTGAAGGTGTTTGCGGATCGAATGTCCCAGCCTTCTCGAGCAGTTCTCATATTCTGCAGGAGATCAAAGTAGACATTTCCAAAGGCCATCACCTCTCTTCTGAATTCAGAGAAGTAAACCCTCTGCAGAAAGTTCCGGCTATTGTTCATGGAAGTTTCAACCTCTCCGAGAGCCATGCAATCATTGTCTATCTTAATTCTGCTTTTCCTGGAATTGCTGACCATTGGTTAGTAGATTCTTTTCTTTTGCTTCTGAAGTCCCTTCCTGATCTACATGGTTGTTTTAAAGAAATACTTCAAATGAACTACGTAGTAAATACTGTACTAGGACCAGCAACTGGCCGTCCACTTAATCCAAAAGCAGCTGCTGAAGCAGAAAAAGTGTTATTTTCTTCTTTATCAAAGCTAGAGGATATTTGGCTCAAAGGAGATGGACGCTTCTTGCTTGGTGGCTCTCAGCCATCTATAGCAGATCTCAGCATGGTTTGTGAACTTATGCAACTTGAGGTTTTGGATGAGAAGAATCGCAGTCGTATATTATCCCCATACAAGAAAGTTCTTCAGTGGATTGATGATACAAGAGCTGCAACAAATCCTCACTTTGAAGAAGTGCATAATATCCTTTATAGAGCTAAAAAGAAATTTGAACAGCAGCGTTCAAGGGTAGTTGAAACTTGGACTGAGCCGAACGACAAGATAGTTGGACATTCAAAGATGTGA 1728 0.4207 MVLSGEATVREKEKMKLKVYADRMSQPSRAILIFCKVNGIDFEEIKVDLSKRQHLSPEFQAINPLRKVPAIVDGRFKLFESYQNIPCLWSVELSSFLLKVMQFSYILHLRFRELQTIDMWMYRSRLVVYVFRWLSAACVSQFVCDKGSYPADLSRRARIHSVLDWHHQNLRRGAGPALGLPLNQQAAAEAEKILISSLTKIENIWLKGDGKYLLGGLRPSIADLSLLLNGKDRDRILGPHKKVQQWIESTRNATRPHFDEVHKILYRLKTKLSEQQSNQADSIQSFLLNADLTLHLLGYVWKHVRTQLNGNFSVFDAQTEKEVEVLPKLVIDDGGKAEGVCGSNVPAFSSSSHILQEIKVDISKGHHLSSEFREVNPLQKVPAIVHGSFNLSESHAIIVYLNSAFPGIADHWLVDSFLLLLKSLPDLHGCFKEILQMNYVVNTVLGPATGRPLNPKAAAEAEKVLFSSLSKLEDIWLKGDGRFLLGGSQPSIADLSMVCELMQLEVLDEKNRSRILSPYKKVLQWIDDTRAATNPHFEEVHNILYRAKKKFEQQRSRVVETWTEPNDKIVGHSKM 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g04400 575 Gene3D Glutaredoxin 9 85 - -
Vimu11g04400 575 Pfam Glutathione S-transferase, N-terminal domain 360 407 IPR004045 -
Vimu11g04400 575 SUPERFAMILY Thioredoxin-like 10 82 IPR036249 -
Vimu11g04400 575 SUPERFAMILY GST C-terminal domain-like 149 263 IPR036282 -
Vimu11g04400 575 Gene3D Glutaredoxin 354 415 - -
Vimu11g04400 575 PANTHER GLUTATHIONE S-TRANSFERASE T1-RELATED 356 561 IPR043377 -
Vimu11g04400 575 Gene3D - 430 565 - -
Vimu11g04400 575 Gene3D - 148 290 - -
Vimu11g04400 575 Pfam Glutathione S-transferase, C-terminal domain 457 527 - -
Vimu11g04400 575 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 407 551 IPR010987 -
Vimu11g04400 575 SUPERFAMILY Thioredoxin-like 356 406 IPR036249 -
Vimu11g04400 575 CDD GST_N_Theta 17 81 IPR040075 -
Vimu11g04400 575 Pfam Glutathione S-transferase, N-terminal domain 15 81 IPR004045 -
Vimu11g04400 575 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 15 96 IPR004045 -
Vimu11g04400 575 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 356 409 IPR004045 -
Vimu11g04400 575 SUPERFAMILY GST C-terminal domain-like 437 547 IPR036282 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g04400 357 555 Glutathione S-transferase Gene Family AT5G41210 55.721 1.77e-71 228
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g04400 K00799 - gmx:100799229 348.591