Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g04370 ATGATTGTTATTGTATTCTGTATAACTGGAATGGTGACCTCACTCATGTATAACCTTCTTCGGGAAATGAAAATGAATGTGAGGGAGATGCATTCTCGAAAACCTCAGCTCTATCGTACTCGTATATCAGATGAGTTCAAGGAATCCAAACAATTGATTCTTGTCTCATCTGATGTTTCATCACGGGGAATGAATTATCCTGATGTCACCTTAGTCATACAGATTGAGAATTCGATGGCAAAGATTGATAATGACATCAAAGAAGCTGCTTATCATGCTTGGCTTGGTTATTACAACTCTATCAGGGAAGTTGGGAGGGAAAAGACCACTGTAGCTGAGCTGGCAAACCGATTTTCTGAATCAATTGGTTTACAGAGGCCTCCTGCTCTCTTCCGAAAAACTGCTATAAAAATGGGTTTGAAAGACATTCCTGGTATTAGAATTCGTAAATAG 453 0.3907 MIVIVFCITGMVTSLMYNLLREMKMNVREMHSRKPQLYRTRISDEFKESKQLILVSSDVSSRGMNYPDVTLVIQIENSMAKIDNDIKEAAYHAWLGYYNSIREVGREKTTVAELANRFSESIGLQRPPALFRKTAIKMGLKDIPGIRIRK 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g04370 150 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 1 144 IPR001650 -
Vimu11g04370 150 PANTHER RNA HELICASE 3 78 - -
Vimu11g04370 150 Gene3D - 2 81 IPR027417 -
Vimu11g04370 150 Pfam Helicase conserved C-terminal domain 4 76 IPR001650 -
Vimu11g04370 150 SMART helicmild6 14 108 IPR001650 -
Vimu11g04370 150 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 76 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g04370 Vimu-Chr11 64994605 64995839 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g04370 4 73 Eukaryotic Initiation Factors Gene Family AT3G19760 31.429 7.78e-07 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g04370 - - ming:122085883 216.468