Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g04306 ATGTATGTTAAGGATAGAGCCACTTGTCCTCAAAGAATACATCAGTCCGCGACCAGTTTTGATTCCATATTAGAGAGAAGAGAAAATCTTGCACATTGGATTTCAGGTGGGGCAACAAATATTATAGAATTATGTGACTGCTTTGAATTAAAACTTCCAATAACTCCTTTTATCTACATATTCAGTGGTGAGAGTGGAGCCGGAAAGACCGAGACAGCAAAAATAACAATGCAATACTTGGCTGCTCTTGGTGGTGGAAGTGGAACGGCTAACGAGATATTACAGACTAATCCAATACTGGTAGCCTTTGGTAATGGAAAAACATTAAGAAATGACAACTCGAGTCGTTTTATAAGATTTCCAATTTATTATATTGACTCTTTTGGTTGA 390 0.3718 MYVKDRATCPQRIHQSATSFDSILERRENLAHWISGGATNIIELCDCFELKLPITPFIYIFSGESGAGKTETAKITMQYLAALGGGSGTANEILQTNPILVAFGNGKTLRNDNSSRFIRFPIYYIDSFG 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g04306 129 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 60 126 IPR027417 -
Vimu11g04306 129 PANTHER MYOSIN 60 120 - -
Vimu11g04306 129 Pfam Myosin head (motor domain) 60 120 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vimu11g04306 129 Gene3D Kinesin motor domain 60 120 IPR036961 -
Vimu11g04306 129 ProSiteProfiles Myosin motor domain profile. 1 129 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vimu11g04306 129 PRINTS Myosin heavy chain signature 98 125 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vimu11g04306 129 PRINTS Myosin heavy chain signature 56 81 IPR001609 GO:0003774|GO:0005524|GO:0016459
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g04306 Vimu-Chr11 64436472 64441577 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g04306 60 117 Myosins gene family AT1G50360 86.207 2.06e-26 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g04306 - K10357 aof:109820358 104.375