Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g04304 ATGTATGTTAAGGATAGAGCCACTTGTCCTCAAAGAATACATCAGTCCGTGACCAGTTTTGATTCCATATTAGAGAGAAGAGAAAATCTTGCACATTGGATTTCAGGTGGGGCAACAAATATTATAGAATTATGTGACTGCTTTGAATTAAAACTTCCAATAACTCCTTTTATCTACATATTCAGTGGTGAGAGTGGAGCCGGAAAGACCGAGACAGCAAAAATAACAATGCAATACTTGGCTGCTCTTGGTGGTGGAAGTGGAACGGCTAACGAGATATTACAGACTAATCCAATACTGGTAGCCTTTGGTAATGGAAAAACATTAAGAAATGACAACTCGAGTCGTTTTATAAGATTTCCAATTTATTATATTGACTCTTTTGGTTGA 390 0.3692 MYVKDRATCPQRIHQSVTSFDSILERRENLAHWISGGATNIIELCDCFELKLPITPFIYIFSGESGAGKTETAKITMQYLAALGGGSGTANEILQTNPILVAFGNGKTLRNDNSSRFIRFPIYYIDSFG 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g04304 129 Pfam Myosin head (motor domain) 60 120 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vimu11g04304 129 Gene3D Kinesin motor domain 60 120 IPR036961 -
Vimu11g04304 129 ProSiteProfiles Myosin motor domain profile. 1 129 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vimu11g04304 129 PANTHER MYOSIN 60 120 - -
Vimu11g04304 129 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 60 123 IPR027417 -
Vimu11g04304 129 PRINTS Myosin heavy chain signature 98 125 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vimu11g04304 129 PRINTS Myosin heavy chain signature 56 81 IPR001609 GO:0003774|GO:0005524|GO:0016459
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g04304 Vimu-Chr11 64426043 64431128 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g04304 60 117 Myosins gene family AT1G50360 86.207 2.04e-26 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g04304 - K10357 aof:109820358 104.375