Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g04266 ATGGAGAGAAAAACAACAGTAGGGTTTATGCTGCTTCTCCTCGTAATCTTTGCTTCCGATGGGAGTATGAAGAGAACGGAGGCGAGAGAATGTCGAACGCCGAGCCGCACTTTCAAGGGTTTATGCTTAAGCGACAAGAACTGTGAATCCGTGTGTAACACCGAAGGTTTCACCGGCGGCAAGTGTGAAGATATGGCGGTGAAGAGAACTGAGGGAAGAGAGTGTTGGACACAAAGCAAGACCTTCCATGGTTTATGCTTCAGCGACCGTAACTGTGAAACCGTGTGCCTTACCGAAGGTTTCACCGGTGGTAAATGTAAAGGCTTCCGTCACCGATGCTTTTGCAGTGAATTATGTTGA 360 0.4806 MERKTTVGFMLLLLVIFASDGSMKRTEARECRTPSRTFKGLCLSDKNCESVCNTEGFTGGKCEDMAVKRTEGRECWTQSKTFHGLCFSDRNCETVCLTEGFTGGKCKGFRHRCFCSELC 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g04266 119 SMART gth_4 74 119 IPR003614 GO:0006952
Vimu11g04266 119 SMART gth_4 30 69 IPR003614 GO:0006952
Vimu11g04266 119 Pfam Gamma-thionin family 74 119 - -
Vimu11g04266 119 Pfam Gamma-thionin family 30 65 - -
Vimu11g04266 119 SUPERFAMILY Scorpion toxin-like 29 66 IPR036574 -
Vimu11g04266 119 PRINTS Purothionin signature 30 45 IPR008176 GO:0006952
Vimu11g04266 119 PRINTS Purothionin signature 46 59 IPR008176 GO:0006952
Vimu11g04266 119 Gene3D - 73 119 IPR036574 -
Vimu11g04266 119 PANTHER DEFENSIN-LIKE PROTEIN 1 6 63 - -
Vimu11g04266 119 ProSitePatterns Gamma-thionins family signature. 73 96 IPR008176 GO:0006952
Vimu11g04266 119 Gene3D - 28 70 IPR036574 -
Vimu11g04266 119 CDD Knot1 84 115 IPR003614 GO:0006952
Vimu11g04266 119 ProSitePatterns Gamma-thionins family signature. 29 52 IPR008176 GO:0006952
Vimu11g04266 119 SUPERFAMILY Scorpion toxin-like 73 119 IPR036574 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g04266 7 63 Plant Defensins Gene Families AT2G02120 48.276 5.72e-12 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g04266 - - lang:109326357 115.161