Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g04264 ATGATTTCGACGGCGGCGACTGTGGAGGCAACCGTCGCCTCTGCTTCTGCAGCAAGAATTATCAATTTTCATGGATACGGAGAGAAAAGCAACAGTAGGGTTTATGCTGCTTCTCCTCATAATCTTTGCTTCTGCGTGAAGAGAACGGAGGCGAGAGGATGTTTAACGCCCAGCCAGAGTTTCAAGGGTTTATGCATAAGCAACGAGAACTGTAAAGCCGTGTGTAGCACCGAAGGTTTCAACAGCGGCAAGTGTGAAGTGTCTTCTACAAGTCAACCACCGAGACACCAATGGGTTCTGAAGAGATACTTGGAAAGCGTGGACGATCGTGACCTGAAGAGCAAGCTAGGTAAGGAAGACCGATCCTCGACCCTAGACAATAGAAACATTTTGGCACCCATTGTGGGGTCAAGGACGCGAGACCATTCGAGAGATGTAGAGATAGATGCAGGAAATGCAGGTGGAAATAACAACCTTGAGGGCAGAACGTGCTGCGGGACAAAGAGAACAATCGACTCAGCAATTAGTGGTACTACTTATGCTCCTATAGGGGAAAATGCTCAGACCGGAGAACTAGAGAGAACGAGACAAGACGCAAGCAGTGCCTTGGCCAAAACCACTTGTATGACCAATACCGACCAGGGTTGCTATCATGAAGGAACCATTGCCATAAAAGAAAATGCCCCTCCAGATCCAGATGAGCATCTTCGATCTTTTGTGAATGCTATGACTTTTTACTCATCAAGTGATTTAGTATGGTGTAAGCTGAGTTCAAAGTCTAACCTACCTCGCCTTGATGAAGATCAACTTATTTGCCTGACCACCAAAAACCATGGGAGAGTTGCAAGAAACGGCGACCGAGTTCATACCCATAAAGGAAATGTGTGCCTTCCAGAAGTGACAACAAAGCAAGGTGGCATCCCCGTCGACGGGACCCTAGGGACCTCCAATCAGTACACACCTTTAAATGCCCCAAGGGCCAACATTTTAGAGGAAGCATTGACACCACCCAGAAATATTTTTCCTTACGCATCATCCGGAAATCTTCTTCCCTATGCATCAAGCCTAAGAGACAACAGAGAGCGTGAGCGTGAGAGAGAGAGAAGAATTTCAGATTCTAAAGAAAGAGAGAAGAAGAAAGCAATAGGTAAAGAAGATGCTGGATGCATGGTTCGGTATTTCTCACGATTTAGTGAACCCGTTTTGGAAGAGGAAGGGAACAAGCCGACGATGCTTCTAACCGACGATGCTTCTGACCGACGATGCCTCCAGTTGCAGGCCGTGACAAGTGGTGACTGCAGGAATGAGAGGGAACCTGTGGTGGTCACGATTTGGGGGATTTTTGGCGAAGAAGAAGACCCTATGTATTTTTCAAGAAAAGAAGGGTTGTGTGTTTTAGAATGGGGCTGGACCGCCGAAGTGTGCTTAAAACTTGATGGTAGCAAAAGAATGCTCTCCTCAATCAGTCCCAATGTTTCTTCATTTTCTCTGACGAAATGGCAATCATCATCCCCAAACACCTCTTCACCCTCCGCGCCGTTTAGGGATAGCAACAGGTCGGGTATGGATAACACCTACTTGCAACCTGACTCTCATGACAAAACTATATCCACCAATATCCACTAG 1626 0.468 MISTAATVEATVASASAARIINFHGYGEKSNSRVYAASPHNLCFCVKRTEARGCLTPSQSFKGLCISNENCKAVCSTEGFNSGKCEVSSTSQPPRHQWVLKRYLESVDDRDLKSKLGKEDRSSTLDNRNILAPIVGSRTRDHSRDVEIDAGNAGGNNNLEGRTCCGTKRTIDSAISGTTYAPIGENAQTGELERTRQDASSALAKTTCMTNTDQGCYHEGTIAIKENAPPDPDEHLRSFVNAMTFYSSSDLVWCKLSSKSNLPRLDEDQLICLTTKNHGRVARNGDRVHTHKGNVCLPEVTTKQGGIPVDGTLGTSNQYTPLNAPRANILEEALTPPRNIFPYASSGNLLPYASSLRDNRERERERERRISDSKEREKKKAIGKEDAGCMVRYFSRFSEPVLEEEGNKPTMLLTDDASDRRCLQLQAVTSGDCRNEREPVVVTIWGIFGEEEDPMYFSRKEGLCVLEWGWTAEVCLKLDGSKRMLSSISPNVSSFSLTKWQSSSPNTSSPSAPFRDSNRSGMDNTYLQPDSHDKTISTNIH 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g04264 541 MobiDBLite consensus disorder prediction 352 381 - -
Vimu11g04264 541 SUPERFAMILY Scorpion toxin-like 53 87 IPR036574 -
Vimu11g04264 541 MobiDBLite consensus disorder prediction 356 381 - -
Vimu11g04264 541 Pfam Gamma-thionin family 53 86 - -
Vimu11g04264 541 ProSitePatterns Gamma-thionins family signature. 52 75 IPR008176 GO:0006952
Vimu11g04264 541 Gene3D - 52 93 IPR036574 -
Vimu11g04264 541 MobiDBLite consensus disorder prediction 496 541 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g04264 Vimu-Chr11 64018321 64025627 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g04264 50 85 Plant Defensins Gene Families AT2G02120 55.556 6.11e-08 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g04264 - - psom:113285914 56.9954