Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g04256 ATGGATTATAAAAATATATTACTGGGTCCACGGATTTGGCATTTTGCTTCAAGTTGCTGTCGAGATTGGGTTGAATTTGGAGTTCTCGCAGGTTGTCGTGATCCCTCGCAGCAAATTGTTACAGAAATTCACAAAATGGCCTTAGCCATGGTTCGTAGGAATGTCATCACCCACTACTCCAAGTTTGCATCTTCTTGGTCTGTGTTGTCTCGCCATTCCTCAATCCACAACCCTTCCTCGGCGTCTGTTTCTCCGTTTCATAGCCAATCTGTTGGTGGTGGTGGTGGTGGTGGTGGAGGATTGCCATCTTACATGCGTGGAGCTGTGTATTGGGAGACTAATAAGCCTCTTTCAATCGAGGAATTTCACATGCCTCGCCCCAAGGCCGGTGAAGTTCTCATCAAAACTAAGGGTAAGGGTACCCTTCAATTCTTGTGCATGCATAACGTTAATGGGAACGAGGCCTGTGGGGTATGCCACTCTGATCTGCATGTTATAAAAGGTGAAATTCCGTTTTCCAGTCCTTGTGTTCTGGGGCATGAGATTACCGGTGAGGTTGTTGAACATGGACCACACTCTGACAGCAAGACAATTGAAAGGCTTCCAGTAGGGTCCCGAGTTGTTGGGTCCTTCATCATGCCTTGTGGCAACTGCTCCTACTGTTCAAAGGGCCACGATGATCTATGTGAAGCTTTCTTTGCCTATAACCGGGCAAAAGGAACCCTCTATGATGCTATTATTTCAAGCCTGGCTATGGAAATTGATAATTTTCCCCCTGCTGTACGACCAGCAACTGCAGTAGTGATTATGATATTATTCAAAAGCCTAGCAATTTGA 837 0.4588 MDYKNILLGPRIWHFASSCCRDWVEFGVLAGCRDPSQQIVTEIHKMALAMVRRNVITHYSKFASSWSVLSRHSSIHNPSSASVSPFHSQSVGGGGGGGGGLPSYMRGAVYWETNKPLSIEEFHMPRPKAGEVLIKTKGKGTLQFLCMHNVNGNEACGVCHSDLHVIKGEIPFSSPCVLGHEITGEVVEHGPHSDSKTIERLPVGSRVVGSFIMPCGNCSYCSKGHDDLCEAFFAYNRAKGTLYDAIISSLAMEIDNFPPAVRPATAVVIMILFKSLAI 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g04256 278 PANTHER NAD-DEPENDENT ALCOHOL DEHYDROGENASE 104 238 - -
Vimu11g04256 278 SUPERFAMILY GroES-like 103 244 IPR011032 -
Vimu11g04256 278 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 179 193 IPR002328 GO:0008270|GO:0016491
Vimu11g04256 278 Pfam Alcohol dehydrogenase GroES-like domain 154 232 IPR013154 -
Vimu11g04256 278 Gene3D - 100 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g04256 Vimu-Chr11 63944566 63946053 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g04256 156 229 Monolignol Biosynthesis Gene Families AT4G37990 40.789 1.53e-10 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g04256 - - gmx:100775182 311.612
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g04256 11 63944566 63946053 Vimu11g04256 11 63944566 63946053 ECH