Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g04222 ATGGGAATGACCCAATGTTCTGCAACTCTATCAGTATTGCCAGAATTAGAAGAGAAGCAGATATTTGATGGAGAGAAGGCTAATTTGCTTGTTAGAGATCTCAGAAAGGGCTTTGATTCAGGCAGGACAAAGAGTTATGAATGGAGGGTTTCCCAGTTAGAGGCCATTATTAAGATGTTAAAAGAGAGAGAGAAGGAAATTACTGAAGCTCTATATAAGGATCTTGCTAAACCTCAACTTGAAGCATTTATATCTGAGGTAGACAACATAGAAGATTGCTACAGTATAATCAAATCAAGGCCAAAACCTCTTGCTGCATATCTCTTCACAAACAATGAGCAGCTGAAGAAGGATTATGTGGATAAGATATCGTCAGGAGGGATACTCATCAATGACGCCGTCATCCATGTTGCAACTCGTGGTTTGCCTTTTGGAGGAGTTGAAGAGAGTGGAATGGGTTGTTACCATGGAAAATTCTCTTTTGATAGTTTCAGTCATAGGAAGTCAGTTCTCTATAGAAGTTTTGATGCAGATTCATCCATAAGGTACCCCCCATACACACCTGAGAAGGAAAAATTATTGAAGGCCATTATCAGTGGCAATATTGTTCAAATAATTCTTGCTCTTTTTGGATGGTCTTAA 642 0.3894 MGMTQCSATLSVLPELEEKQIFDGEKANLLVRDLRKGFDSGRTKSYEWRVSQLEAIIKMLKEREKEITEALYKDLAKPQLEAFISEVDNIEDCYSIIKSRPKPLAAYLFTNNEQLKKDYVDKISSGGILINDAVIHVATRGLPFGGVEESGMGCYHGKFSFDSFSHRKSVLYRSFDADSSIRYPPYTPEKEKLLKAIISGNIVQIILALFGWS 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g04222 213 Pfam Aldehyde dehydrogenase family 84 170 IPR015590 GO:0016491
Vimu11g04222 213 PANTHER ALDEHYDE DEHYDROGENASE 26 90 IPR012394 GO:0006081
Vimu11g04222 213 SUPERFAMILY ALDH-like 26 83 IPR016161 GO:0016491
Vimu11g04222 213 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 20 95 IPR016162 GO:0016491
Vimu11g04222 213 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 96 199 IPR016162 GO:0016491
Vimu11g04222 213 Coils Coil 50 70 - -
Vimu11g04222 213 SUPERFAMILY ALDH-like 84 194 IPR016161 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g04222 Vimu-Chr11 63709186 63712911 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g04222 6 98 Aldehyde Dehydrogenase Gene Family AT4G34240 55.319 4.57e-26 103
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g04222 11 63709186 63712911 Vimu11g04222 11 63709186 63712911 ECH