Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g04196 ATGGATCCATCTACATCTCTTGTTAGTTCAGATGCCTCAACATGTGGTAAACTTCTGATATACAAGTTTCACCTATCCACAGAAAATGGGTATCGGAAGGAAATAGGATTGACAGAAGCAATAGTATCTGCATCTGAAAAAGTGGGGTTGAAGAAGTACCTTGTTTTCAACCTTGGTGAAGCTCCACAAGGCACTGAAACCAGTTGGTTCATGCAAGAGTATCATATTTGCTCATCCAGTTTTAGCACTGCCTCTTCTGGAAGCACTCGAGGAAGAAGAAAATCTGATCAGTGTAGGAGCAAGTGGGTTTTGTGCAAAGCCTATGAGAAGAAAAGTTGTGAAGGGCAACAAGGTGTAAATTGTGACAAGGATGAGAATGACAGTGGAACTGAGCTTTCATGGCTAGATGAATTTTATATGTCATTAGATGATGACATTGAAGAAGTTATGAGCCTTCCAAATTAG 465 0.4022 MDPSTSLVSSDASTCGKLLIYKFHLSTENGYRKEIGLTEAIVSASEKVGLKKYLVFNLGEAPQGTETSWFMQEYHICSSSFSTASSGSTRGRRKSDQCRSKWVLCKAYEKKSCEGQQGVNCDKDENDSGTELSWLDEFYMSLDDDIEEVMSLPN 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g04196 154 Gene3D NAC domain 19 114 IPR036093 GO:0003677|GO:0006355
Vimu11g04196 154 PANTHER NAC TRANSCRIPTION FACTOR 56 27 124 - -
Vimu11g04196 154 SUPERFAMILY NAC domain 26 110 IPR036093 GO:0003677|GO:0006355
Vimu11g04196 154 Pfam No apical meristem (NAM) protein 27 76 IPR003441 GO:0003677|GO:0006355
Vimu11g04196 154 ProSiteProfiles NAC domain profile. 1 110 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g04196 Vimu-Chr11 63506526 63507454 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g04196 30 120 NAC Transcription Factor Family AT3G15500 36.264 3.03e-14 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g04196 - - gmx:100779578 213.001
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g04196 11 63506526 63507454 Vimu11g04196 11 63506526 63507454 ECH