Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g04194 ATGCCTATTACAATGAAAAGAAAATTGGCAACAAAATCATTGGCGTTTGATGTAAATGAAACGGAACCTATAATATGCTATGCAGCTACCATGATATCATCAGAAGGGCTTTGGCATAAGGAAAACCCTTTGTACTATTCTCTGCCTCTCTTTCTCTTGCAATTACTGTTAATTCTCGTTATCACCCGTCTATTTGTGTACATACTCAAGCCCATTCGCCAGCCACGCGTTATTTCTGAACTCATGGGAGGCATAATATTGGGTCCTTCGGTGCTTGGGAAAATCAATACATTTAAACATGCAGTTTTTCCGCAAAGAGGTGAGATCTTGCTTGAAACAATGGCAAATGTTGGCATTGTATATTTTATGTTCTTGGTGGGAGTGGGAATGGATGCAGCATCGTTAAGACGCATAGGTAGAAAAGCAGTGGCCATAGCAGTTCTAGGCATGGTCCTCCCTTTCGTAATTGGAGCTCTCTTCGCTCTGTATTTGATCAAATTCGACGGAATATCAGAAAAAAACACCGCTAACGTCCTATTCATTGGTTCAATTCTTTCTGTGGCAGCGTTTCCCGTTCTAGTGAGAATCCTTGCAGAGCTGAAATTCATCAACTCTGAGTTGGGAAGGATTGCTCTTTCATCTGCACTCGTCAATGATCTGCTTTCATGTCTGCTCTTGATTCTTTCTATTAATTTGGCACAACGTAATAGGCCTTCTATCACTCTGCTGTCGACTTTCTTGTCAAGTATAGGGTTTATTGCTTTTAATATTTTTGTGGTGAGACCTGGGGTGTTGTGGATGGTAAGGAAAACCCCGGAGGGTGAAACATTCAGTGATTTCTATATTTGCATAATATTAGCAGGTGTGATGCTATCAGGTTTGGTCACAGATGCTATTGGAACCCATGCAGTTTTTGGAGCCTTTGTGTTTGGTTTGACAATCCCAAATGGACCTCTAGGGCTCTCTCTTGTGGAAAGGCTAGAGGACTTTATAACGTTGATTTTGCTCCCTCTATTTTTCGCCACTAATGGCCTAAAAACTGATCTTGGACTGCTCGATGACCTCCAAGAATGGGTTATTTTGATCACTCTTGTTATTTTGACTAGCATTGGCAAAATCGTTGGCACTATGGTCGCTGCATTCTATTATCAAATATCAGTTCGTGATGGAGCAGTCCTTGGTTTACTCCTGAACACAAAAGGCGTTGTTGAAATTATTGTGATTAACATTGGCAAGGATAAAAAGGTTTTGACCAGCGAATCTTTTTCAACCTTGATGCTTATAACCATACTAATGACCGCAATCATTGTACCTGGGATGTCACTTATATACAAACCAATAAGAGGAGTGATACCTTACAAAAGAAGAACCATTCAAATGTCACAAAAAGAATCAGAGTTCAGAGTCCTAGTTTGTATCCACACTCCTCGAAATGTGCCGACAATGGTTAACCTCCTTGACGCCACTAACCCTTCAAAGAGGTCCCCGATATGCATTTACTTGCTTCATTTGACCGAACTCAGTGGCCAGGCATCTGCCTTATTCCTTGTTCAACATCATACCGCCAAGGATCCAGACCAACCAGCCTATAACAAGACTGAAGCTCAATCCGAACACATAATCAATGCCTTTCGAAACTACGAGCGTCATGCTTGCCACGTCTCAATGCAACCCTCAATAGTCATCTCCCCTTACTCCACCATGCACGAGGACGTATGCAACATGGCTCAGGAAAAGCGTGTGGCCTTCATTATCGTCCCTTTCCACAAACATCAAGCGGTTGACGGTGAAATGGAGCCCACCAACATGTCACACCGAACTGTGAACCTCAATATTCTAAGCCAAGCACCTTGCTCCGTTGGGATTCTAGTGGATAGAGGGTTTAGTACGTGCAGCCATCTGGCTCCAGATCAAAATTCTCGCAATGTGGCAGTGTTGTTCTTTGGAGGGCCTGATGATAGAGAAGCCCTGAGCTATGCATGGAAGATGTCAGAAAATCCAGGGATAAACCTTACTGTGATGCGTTTTGTTCATGGAGAAGAAGTAATGCATCAACATAGTGACCTCAGTCCTGACGAAAGTACGGTACTAACAGTGAAAACGGATAAGGACACTCAGAAGAAACTTGATGAGAGGCTTATAATGTGGTTTAGGACAAGCTGTGAGGATGATGGCTCAGTTGTTTATGTCGAGAAAATGGTGAACAATGGAGAGCAGACAGTAGCAGCAATAAGGTCAATGGATGATATTCACGACCTTTTCATAATTGGGAGAAGCGAAGGAATGAAATCACCACTCATAGCAGGACTCACTGATTGGAGTGAGTGTCCTGAGTTAGGGGCAATTGGGGACTTGTTGGCTTCGTCAGATTTTGCAGCCACTGCTTCTGTGTTGATAGTGCAGCAATATCTTGGACAAGGAACGGAAGATGTCTTGGAAACAAACGAGGAGGAGGAGCAGACACTACCACCATGA 2475 0.4303 MPITMKRKLATKSLAFDVNETEPIICYAATMISSEGLWHKENPLYYSLPLFLLQLLLILVITRLFVYILKPIRQPRVISELMGGIILGPSVLGKINTFKHAVFPQRGEILLETMANVGIVYFMFLVGVGMDAASLRRIGRKAVAIAVLGMVLPFVIGALFALYLIKFDGISEKNTANVLFIGSILSVAAFPVLVRILAELKFINSELGRIALSSALVNDLLSCLLLILSINLAQRNRPSITLLSTFLSSIGFIAFNIFVVRPGVLWMVRKTPEGETFSDFYICIILAGVMLSGLVTDAIGTHAVFGAFVFGLTIPNGPLGLSLVERLEDFITLILLPLFFATNGLKTDLGLLDDLQEWVILITLVILTSIGKIVGTMVAAFYYQISVRDGAVLGLLLNTKGVVEIIVINIGKDKKVLTSESFSTLMLITILMTAIIVPGMSLIYKPIRGVIPYKRRTIQMSQKESEFRVLVCIHTPRNVPTMVNLLDATNPSKRSPICIYLLHLTELSGQASALFLVQHHTAKDPDQPAYNKTEAQSEHIINAFRNYERHACHVSMQPSIVISPYSTMHEDVCNMAQEKRVAFIIVPFHKHQAVDGEMEPTNMSHRTVNLNILSQAPCSVGILVDRGFSTCSHLAPDQNSRNVAVLFFGGPDDREALSYAWKMSENPGINLTVMRFVHGEEVMHQHSDLSPDESTVLTVKTDKDTQKKLDERLIMWFRTSCEDDGSVVYVEKMVNNGEQTVAAIRSMDDIHDLFIIGRSEGMKSPLIAGLTDWSECPELGAIGDLLASSDFAATASVLIVQQYLGQGTEDVLETNEEEEQTLPP 824
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g04194 824 Gene3D - 50 448 IPR038770 -
Vimu11g04194 824 PANTHER CATION/H + ANTIPORTER 25 803 - -
Vimu11g04194 824 Pfam Sodium/hydrogen exchanger family 57 438 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Vimu11g04194 824 Gene3D - 488 770 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g04194 Vimu-Chr11 63493153 63495813 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g04194 24 810 Antiporter Super Family AT2G13620 58.450 0.0 950
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g04194 K26731 - gmx:100779048 1070.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g04194 11 63493153 63495813 Vimu11g04194 11 63493153 63495813 ECH