Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g04190 ATGATCAAAGATGGGTCTAAATTAGCCATGTTTGTGCTACTAATTGAAAAGGGTACTAACTCAGTAAAGACTAGTTTGTGCCGTGTTATAGAGTCAGCATCATGGTCATCTGAGACAGAAGATTTGTGCTATATTCTTGGAAATTCTCCCAAACTAGTACAGGAGATTGTTGAAGTTGTTAACCAAAATTATGAAGTTTCTGGGGATGCAATTAAAGCGATGTCAGCACTGTGTTCGTTGCACTCCAATAGAGAGAGTTTGGTGAGAGAAAGAGCAATAGAAGGTATCATGAGATACATCTCATCAGAAAGAAGAGAGCTGGCCCCACTGGCAGTGAGAACAGTTGAGAAACTTATGGGGCTGGAAAGTGCTAAAGTTGCATTGGTGAACCACCCTAATGGTGTTCGGACATTGGTCAATATGGTTTTCAAGGTATCTGATCAAGAATGCAGTGAGAGTGCTGTTGAGGTGCTTTTAGTTGTTTGTGGTGAATTTGAGTGTGCAAGAGAGACAGCCATTGAAAGTGGAGTTTTGACTAGGTTGTTGTTGCTCCTGCAGAGTCAGAGTAGTAACACAACAAAATCAAAGGCAAGAATGCTACTAAAATTGCTAAGATCAGAGGCAAAGAACAATTAG 636 0.4057 MIKDGSKLAMFVLLIEKGTNSVKTSLCRVIESASWSSETEDLCYILGNSPKLVQEIVEVVNQNYEVSGDAIKAMSALCSLHSNRESLVRERAIEGIMRYISSERRELAPLAVRTVEKLMGLESAKVALVNHPNGVRTLVNMVFKVSDQECSESAVEVLLVVCGEFECARETAIESGVLTRLLLLLQSQSSNTTKSKARMLLKLLRSEAKNN 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g04190 211 Gene3D - 8 211 IPR011989 -
Vimu11g04190 211 SUPERFAMILY ARM repeat 47 204 IPR016024 -
Vimu11g04190 211 PANTHER WDSAM1 PROTEIN 12 210 IPR045185 GO:0061630
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g04190 Vimu-Chr11 63466805 63467799 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g04190 4 203 U-box Gene Family AT3G52450 29.018 2.57e-09 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g04190 - - vum:124836871 360.918
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g04190 11 63466805 63467799 Vimu11g04190 11 63466805 63467799 ECH