Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g04183 ATGAAACGGTGGTCGCGCCGGAAGCCTCGCCGGCGAGCGTGGTGCTGCTCGTTCGCAATCCCTCCCTCTAGTCCCGAACTCACTTCAATCTCCAAATCGCCTCACAAAGCGCAACCCTTTCCCAAACGCAGCGTTTCGGTCCCTAACTCTCCTCAGAGCGCCAAATCCGGGTTCCCCATCGTGGGTCGGATCGACCCGCGCCGGATCTTGTCGCCGGGAAGAGTCTCTCCCATTGACTCCGATCCCACCCCCTCCGTGTCGCAACTCCGATCCCCTAGCTTTCGCGCTCCCTCCCCGCCGCCGGTGGCGGATGCCGCGGCGCTGGACGTGAAGCTAAAGCTGCGAGGGAAGAACGGGGGGAGCATGGTGATGGAGGTGGACTCGGAGGTTCTTGAAGCGAACTCGGAGGTGTTTGCGGGTTTGATAGCGGATTGTAAGAGAGGTGGGGGTGGAGCGACGATGGAGGTGGAGAACTTGGGTGTGTTCAGCGACACCATCGAGCTTATGTTTGAAGATGATGGTTGCATCACCAAGAAGCTCATCAACGTTGGCGTTTTTCGCTCCATTGACATTTTAGAGGTTTCGGCAGGAATTATGTTCACTAAGGGCGTTCGGTGTTGTTTAAAGTACCTTGAGGCGGTTCCTTGGACTGAGGAGGAAGAAGAGAAACTGAGGAGCCTTTTCACAAGATTTGAGTTCGATGATGCAACAACAAGAGACATTTTGGGAAGACTGTACTTGCACGACTCAGTAGATTCCCGGCCAAACGTTGCACAACAACTTGTTCGGTCAATCACCACTTCTGAGGATGCAAATGCCAGAACTGAAATGAAGTCACTAGTCAAGGGTCTTCTCTGCAAAAGTTCTGTGTATGAGAAGAACCATCTTGACCTTAGCAAGGAGGATCTATTTACTGTTTGTGACTCGTGTTTGAGTTCGCTTATCAGTCTCTTTGAAGAGGCATCAGATACCATGCGTCCTGAAAGTTTGATTACAAAAGACACGAACAAGCCTCTGATTGAACGAATCTCAAGACAGGTTGATAACATTAACTGGTTGCTTGAAATTATGCTGGATGGGCAAGTGGCAGAGGACTTTGTGGATGTATGGGCACGTCAGGAAAAGCTTATTAAAATGCATGACGTTACCTCCCCTATGATAAGATATGAGCTCAGTAGAGTCTCAGCAATTCTATTTGTTGCTATGGGTACGAGAAAACTGCAATGCCCTTTGGAGGCTAGATCAGGGCTTCTCCAAGCATGGTTTGGACCTATGCTGTTGGACTTTGGTTGGCTTCAAAGATGCAAAAAAGGGCTTGATATGAAGGCCTTGGAAGAGGCTATGGGGCAGACACTACTTACTTTACCTTTAAAGCAGCAGTATGTGCTGTTTATGGAATGGTTTCGGCATTTTTCAAGACATGGCACTGAGTGCCCAAATATGGGCAAGGCATTCCAAATTTGGTGGCGTAGATCTTTCTTAAGAAGCTCTGAGGCTGTTGAATCAAGATAG 1512 0.4954 MKRWSRRKPRRRAWCCSFAIPPSSPELTSISKSPHKAQPFPKRSVSVPNSPQSAKSGFPIVGRIDPRRILSPGRVSPIDSDPTPSVSQLRSPSFRAPSPPPVADAAALDVKLKLRGKNGGSMVMEVDSEVLEANSEVFAGLIADCKRGGGGATMEVENLGVFSDTIELMFEDDGCITKKLINVGVFRSIDILEVSAGIMFTKGVRCCLKYLEAVPWTEEEEEKLRSLFTRFEFDDATTRDILGRLYLHDSVDSRPNVAQQLVRSITTSEDANARTEMKSLVKGLLCKSSVYEKNHLDLSKEDLFTVCDSCLSSLISLFEEASDTMRPESLITKDTNKPLIERISRQVDNINWLLEIMLDGQVAEDFVDVWARQEKLIKMHDVTSPMIRYELSRVSAILFVAMGTRKLQCPLEARSGLLQAWFGPMLLDFGWLQRCKKGLDMKALEEAMGQTLLTLPLKQQYVLFMEWFRHFSRHGTECPNMGKAFQIWWRRSFLRSSEAVESR 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g04183 503 PANTHER OSJNBA0011J08.25 PROTEIN-RELATED 99 497 IPR038920 -
Vimu11g04183 503 MobiDBLite consensus disorder prediction 20 101 - -
Vimu11g04183 503 MobiDBLite consensus disorder prediction 78 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g04183 Vimu-Chr11 63399036 63401202 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g04183 - - pvu:PHAVU_002G271800g 916.376
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g04183 11 63399036 63401202 Vimu11g04183 11 63399036 63401202 ECH
Vimu11g04183 11 63399036 63401202 Vimu10g01751 10 24459877 24462067 PCT