Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g04157 ATGCTTTGGTTTTTATATGCAGGGCGAGCAAGAAATATCCATTTCGTTTTCTACCTTGACAGTGACACTGCTGTCTCAGTTTCAAGCGAAATGGTTGAGCAACTTGAGCTTGCTGATCAGAATGTTAAATTCATAGCTGAGTTAATAGATTTGTTATTGATGAATCTGATTGCTGACTGGAAACCCTGTGTAGCAATTGATCACTTGGTTTCTCCTAGTAATAAACAAACTCATGTGAGCCAACGGGGAGAATTGGAGTTAGCAAAATGCACAGGCAGCTCTAAAGATTCGACTGAAGATCTAGGTCCCTCTACCTCCTCTGCAATATTAGCTACAAAAGGAAACCTTGACAATATGGATATCGATGGGGCTTTATCTGACGAGTGCAGTGGTCTTCAGAAAGCAACCAAGGCAGATGATCTATCCTCTGAGAAGTCGTATGCATCTGCAACAACTGACTTCAATGAGAATAAGTTTTCCACGGTTTCATTTATGTCTGCTAAATCAGAATTTGATGGAGGGAGTAAATCTTCACCTGTATCTGAAATTGGGGCATCGTATGATCGTAAGAGCAAGTTTTTGGACATGAAAGGCTTCTCCAATATTCTGGACATCGCTTCCTCCTCTTCTGAAGCGGAGGGTGAGTTGAAATTAGAGTTACAAATGATTGAACAGAAGTATCAAGAGGCAATGAATGATTTATCCCAAAGAAGATACCAGGCCATCTTGGATATTAGAAGGAGAATGTCACAAAAGATGGTGTCGTAG 768 0.4062 MLWFLYAGRARNIHFVFYLDSDTAVSVSSEMVEQLELADQNVKFIAELIDLLLMNLIADWKPCVAIDHLVSPSNKQTHVSQRGELELAKCTGSSKDSTEDLGPSTSSAILATKGNLDNMDIDGALSDECSGLQKATKADDLSSEKSYASATTDFNENKFSTVSFMSAKSEFDGGSKSSPVSEIGASYDRKSKFLDMKGFSNILDIASSSSEAEGELKLELQMIEQKYQEAMNDLSQRRYQAILDIRRRMSQKMVS 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g04157 255 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 8 248 - -
Vimu11g04157 255 Coils Coil 213 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g04157 Vimu-Chr11 63146501 63147268 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g04157 8 77 MAP Kinase Kinase Kinase AT1G49160 67.143 5.23e-27 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g04157 K08867 - var:108344372 298.901