Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g04139 TCACAGATCGTAACAGAAAACACCATGAAAGGAAACAAGCCTTATCTAGTTGTGATCCTCATACAAGCCATCTACGCTGCTATGTTTCTGCTCTCAAAAGCAGCATTTGACCATGGCATGAACAATTTCATCTTTGTCTTCTATAGACAGATCGCAGCCACCATATTCCTCATCCCTTTCGCTTTCTTCTTTGAATGGAAAACTGCACCTCCTTTGTCATTCGTGGCCTTCTGCAAGATCTTTTTTCTTTCTTTTCTGGGGATCACTGCCAGCTTGGACATATATGGTATTGCCCTTGTTTATACTTCTGCTACTTTGGCTGCTGCTATCACAAACTGTCTCCCAGCCATCACCTTTTTCTTAGCGTTACTGCTCAGGATAGAAGTTTTGAAGGTAAAGAGTGCTTCTGGTATTGCTAAGTTGGCTGGAGTAGTGGCATGCTTAACTGGAGCAGCAATCCTTGCTTTCTATAAAGGTCCTCATTTGGAGCTTTTAAGCCATTTTAACCTTTTAGGGTACCATAAAAGCCAACAACACCTGGGTCATGTTGCATCTAGTTCATGGATAAAGGGTTGCTTCCTCATGCTCCTCTCCAGCACCTTTTGGGGAATGTGGCTTGTGCTACAGACTTTTGTCATTAAAGACTACCCTTCAAAGCTGCTCCTCACAACTCTTCAGTGTTTCTTAAGCTCCATTCAGTCTTTGGGCATTGCTTTGGCAGTAGAAAGAGACATTGAGCAATGGAAATTAGGGTGGAATGTCAGACTCCTTGCTGTTGTTTACTGGAATTATGGTGACTGGTCTAACATATTACTTACAAGCTTGGGTTATAGAGAAGAAAGGACCAGTGTTTCTGGCCATGGCAACACCACTGTCTCTCATAATGACCATCTTCTCCTCCACATTTATCTTGGGCGAAATAATAACTTTGGGAAGCATTTTAGGCAGCATCGCTTTGGTTATTGGACTTTACTGTGTGCTGTGGGGAAAGAGCAGAGAGCAAATGCCAAAAGCTTCCTCGGATTTGGAGGAGGCATCATCGACTTAGAGTCATTCACAAATCACAAACTTCTATGA 1077 0.428 SQIVTENTMKGNKPYLVVILIQAIYAAMFLLSKAAFDHGMNNFIFVFYRQIAATIFLIPFAFFFEWKTAPPLSFVAFCKIFFLSFLGITASLDIYGIALVYTSATLAAAITNCLPAITFFLALLLRIEVLKVKSASGIAKLAGVVACLTGAAILAFYKGPHLELLSHFNLLGYHKSQQHLGHVASSSWIKGCFLMLLSSTFWGMWLVLQTFVIKDYPSKLLLTTLQCFLSSIQSLGIALAVERDIEQWKLGWNVRLLAVVYWNYGDWSNILLTSLGYREERTSVSGHGNTTVSHNDHLLLHIYLGRNNNFGKHFRQHRFGYWTLLCAVGKEQRANAKSFLGFGGGIIDLESFTNHKLL 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g04139 358 PANTHER WAT1-RELATED PROTEIN 13 262 IPR030184 GO:0016020|GO:0022857
Vimu11g04139 358 SUPERFAMILY Multidrug resistance efflux transporter EmrE 48 158 - -
Vimu11g04139 358 Pfam EamA-like transporter family 13 139 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g04139 Vimu-Chr11 63045464 63049175 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g04139 9 261 Nodulin-like Gene Family AT5G64700 62.646 1.34e-97 288
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g04139 - - gmx:100775854 454.521
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g04139 11 63045464 63049175 Vimu10g01799 10 25396451 25399845 PCT