Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g04077 ATGATTTGGATTGCGATTCTTTTGCTTTCTCTTGCTTGTCTGTGGCTGTGGAGAAGGAACAGCAAGGCAAAGAAATTACCACCGGGTCCAAGAGGGTTGCCAATTTTGGGTAGCCTTCACAAGTTGGGACCAAATCCCCATCGTGATCTGCACCAATTAGCCAAAGAATATGGATCTGTCATGTACTTGCGGTTAGGTGTTGTGCCCACTATTGTTGTTTCTTCACCCCAAGCTGCCGAGCTCTTCCTCAAGACCCATGACCTTGTTTTTGCCAGTAGACCACCTCATGAAGCTGCAAGATACATCTCTTGGGAGCAGAGAAACTTAAGCTTTGGTGAATATGGTTCTTACTGGCGCAACATGCGGAAGATGTGCACGTTGGAATTGCTAAGCCAAACCAAGATTAACTCCTTCAGAAGCATGAGGGAAGAGGAGCTTGACCTATTGATCAAGGATCTGAGAGAGGCAGCGAAAGATGGAGCTGCTGTTAATCTCAGCGCTAAAGTCTCAACACTCAGCGCAAACATGGCTTGTAGAATGGTCTTAGGGAAAAAGTACATGGACAAGGACTTGGATGAGAAAGGGTTCAAAGCTGTGATGCAAGAGGGAATGCATTTATCAGCAACTCCTAACATGGGAGATTACATCCCTTACATCGGTGCACTTGACCTACAAGGCTTAAAGAAGCGCATGAAAGTAGTTGGCAAAATCTTCGATGACTTCTTTGAGAAAATCATTGACGAGCACATGCAATCACAGAAGGGAGAAGACAAGACAAAGGATTTTGTTGATGTCATGTTGGGATTCGTGGGTACTGAAGAATCCGAATACCGAATTGAGAGGCCCAATATCAAAGCCATATTGTTGGATATGTTGGCTGGCTCGATGGATACTTCTGCTACAGCAATAGAGTGGACACTTTCAGAGCTGCTAAAGAATCCAAGGGTGATGAAGAAAGTTCAAATGGAATTGGAAAGCGTGGTGGGTATGGAGAGGAAGGTGAAAGAATCAGACTTAGAGAAGTTAGAGTATTTGGACATGGTTGTAAAGGAAAGCCTGAGACTGCATCCGGTGGCACCTTTGCTGATACCACACCAGTCCATAGAAGACTGCATGGTTGGAGATTATTTCATTCCTAAAAAATCAAGGGTTATAGTGAATGCATGGGCTATTATGAGAGACCCAAGTGCTTGGGATGAAGCAGAGAAGTTCTGGCCAGAAAGATTTGAAGGAAGGAACATAGATGTTAGAGGTCGTGAGTTTGAGCTGATACCATTTGGGTCTGGCAGAAGAGGGTGTCCAGGAATACAGTTGGGTCTAACTGTGATTCGTCATACAGTGGCACAAGTTGTCCATTGTTTTGATTGGAAGCTTCCAAATAACATGTTACCATCGGAGTTGGATATGGCAGATGAGTTTGGCCTCACAATGCCTAGAGCTAATCCTCTGCGAGCAATTCCTACTTACAGGCTTTCCACTGAAATGGACTATTGA 1494 0.4458 MIWIAILLLSLACLWLWRRNSKAKKLPPGPRGLPILGSLHKLGPNPHRDLHQLAKEYGSVMYLRLGVVPTIVVSSPQAAELFLKTHDLVFASRPPHEAARYISWEQRNLSFGEYGSYWRNMRKMCTLELLSQTKINSFRSMREEELDLLIKDLREAAKDGAAVNLSAKVSTLSANMACRMVLGKKYMDKDLDEKGFKAVMQEGMHLSATPNMGDYIPYIGALDLQGLKKRMKVVGKIFDDFFEKIIDEHMQSQKGEDKTKDFVDVMLGFVGTEESEYRIERPNIKAILLDMLAGSMDTSATAIEWTLSELLKNPRVMKKVQMELESVVGMERKVKESDLEKLEYLDMVVKESLRLHPVAPLLIPHQSIEDCMVGDYFIPKKSRVIVNAWAIMRDPSAWDEAEKFWPERFEGRNIDVRGREFELIPFGSGRRGCPGIQLGLTVIRHTVAQVVHCFDWKLPNNMLPSELDMADEFGLTMPRANPLRAIPTYRLSTEMDY 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g04077 497 PRINTS E-class P450 group I signature 423 433 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g04077 497 PRINTS E-class P450 group I signature 387 411 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g04077 497 PRINTS E-class P450 group I signature 283 300 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g04077 497 PRINTS E-class P450 group I signature 303 329 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g04077 497 PRINTS E-class P450 group I signature 346 364 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g04077 497 PRINTS E-class P450 group I signature 433 456 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g04077 497 PRINTS E-class P450 group I signature 172 190 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g04077 497 PRINTS E-class P450 group I signature 54 73 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g04077 497 Pfam Cytochrome P450 27 472 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g04077 497 CDD CYP71-like 56 483 - -
Vimu11g04077 497 Coils Coil 495 497 - -
Vimu11g04077 497 PANTHER CYTOCHROME P450 93A3-LIKE 3 492 - -
Vimu11g04077 497 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 426 435 IPR017972 GO:0005506|GO:0016705
Vimu11g04077 497 SUPERFAMILY Cytochrome P450 27 490 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g04077 497 FunFam Cytochrome P450 83B1 14 486 - -
Vimu11g04077 497 Gene3D Cytochrome P450 15 487 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g04077 497 PRINTS P450 superfamily signature 424 433 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g04077 497 PRINTS P450 superfamily signature 294 311 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g04077 497 PRINTS P450 superfamily signature 347 358 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g04077 Vimu-Chr11 62513855 62516165 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g04077 2 488 Cytochrome P450 AT3G26300 39.394 2.83e-130 385
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g04077 K20562 - gmx:100809526 857.055