Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g04054 ATGTTTGAAATCTTATATTGTTCCGAAGGTGGCAATATCTTTGACAAAGATAATTTGGATGTCGATCGGAGCAGGCACAGAAACGCTGGGAAGACTTCCAGGCACAGATCTCTTCTGCGATGTACAATGGCTGTTAAGACTCCTGGGGTTGCAATAATACGCCTCAAGTCTGCATTCCTTTGCTTTTCTAATGCCAATTCAGTCAGAGAGGATCCTGAAATGGATCACTCGGGAAGATGCAAAGGGGAAAATAGAAGGCACCACCGGAAGCATAGTTCAGCTCGGATTGCTTCGCTAGAGGAACTGCATGAGAGTTTGGTTTCAAGTGGAAAGCAGCTAGCAATTGCCAATCCTGGGTGGCAAGTGATTTACAAGCTAAAGGCAACCAACTTTGTTGCAAGAATTGGAGGAAGGGTCTTCTTGACTATTGGAGAAGCTATTGACTGCAATCTGGATTTCTAA 462 0.4437 MFEILYCSEGGNIFDKDNLDVDRSRHRNAGKTSRHRSLLRCTMAVKTPGVAIIRLKSAFLCFSNANSVREDPEMDHSGRCKGENRRHHRKHSSARIASLEELHESLVSSGKQLAIANPGWQVIYKLKATNFVARIGGRVFLTIGEAIDCNLDF 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g04054 153 MobiDBLite consensus disorder prediction 72 91 - -
Vimu11g04054 153 Gene3D STAS domain 31 151 IPR036513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g04054 Vimu-Chr11 62350238 62351085 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g04054 43 148 Inorganic Solute Cotransporters AT5G10180 43.802 5.72e-24 95.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g04054 K17469 - gmx:100775538 130.183