Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g04053 ATGTCCGTTGTAGTGATAATATCACTGCAATGTTTGACGAAGCTATTGTACTTTACACCGACTGCTATTCTGGCTTCGATAATCTTTTCAGCTCTGCCGGGACTCATAGACATCAACGAAGCTTACAAAATATGGAAAGTTGATAAGCTTGATTTTCTTGCTTGTGTTGGAGCCTTCTTCGGTGTGATCTTTGCGTCAGTGGAACTTGGTCTGCTAGTGGCCGTAACTGCAACACTTTTCAACATATTAACAGTTATATATATAGTACTTATCTTTTTCTTATTTTGGATTAATATGATTAATGCCGACACACATCCAACATTTTCTGCTAAATACATCAACCTTCTGATCAATATATTCAAACAATGCATGGCAGACGGTGTTGAATTCGATCTCCTTAAATAA 405 0.3704 MSVVVIISLQCLTKLLYFTPTAILASIIFSALPGLIDINEAYKIWKVDKLDFLACVGAFFGVIFASVELGLLVAVTATLFNILTVIYIVLIFFLFWINMINADTHPTFSAKYINLLINIFKQCMADGVEFDLLK 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g04053 134 PANTHER SULFATE TRANSPORTER 1 83 IPR001902 GO:0016020|GO:0055085
Vimu11g04053 134 Pfam Sulfate permease family 1 56 IPR011547 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g04053 Vimu-Chr11 62343504 62343908 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g04053 1 75 Inorganic Solute Cotransporters AT5G10180 76.000 5.04e-32 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g04053 K17469 - gmx:100775538 142.124