Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g03964 ATGTCCAAACCCTGGGGCAACATCGGAGCATGGGCCGCCGATTCCGAGCGAGCCGAGGCCGAGGAGCGCGAGGCCCAGGCTGCGGCCGCGGCTGCCGAGACCCAAAACTTCCCCAGCCTCAAGGAAGCCATCAGCTCCAAGCCCAAAAAGAAGAAGGGTACAACCATCTCGCTCTCTCAGTTCAACCAAGGCGGTTTTCCCTCCGCCGGCGAGCACCAGGGCCTCACACGCGACGAGATGTTGGCGCTTCCCACCGGTCCCAAGGAACGCTCCCCCGAGGAAATGCAGTTCAACCGCCTCGGCGGCGGTTTCTCCTCATACGACCGCTCCGCCGGTCGCTCTCGCGACCGCGACGGCGGAAACAACGACGGCTCCTGGGGCGGTGGCGGGAGAAGATCCTATGGCGGATTCGACGAGGAACGCAGGGGTCCGAATCCTAGGGTTTCGGAACTCGATCAGCCTTCCAGGGCTGATGAGGTGGACAATTGGGCCTCCGTGAAGAAATCTGTTCCCGCGTTTGATTCTGGTCGGCAGAATCGCTATGGGGGAGGCGGTGGCGGCGGCGGCGGTTTTGGTGGCGGAGGTGGTGGTTTTGGTGGCGGCGGTGGCGGTGGTTTTGGTGGTGCGTCTAGGGCTGATGGTGTGGATAATTGGGCGGTTGGTAAGAAGGCTGCTCCTGTTAGATCTTCCAATTTTGGTTCAGGTTTTCGTGATTCGGGCGTGGAACCGGATCGTTGGTCGAGAGGTGGTCCGTCGCGTGAGACGGAACGGACGGAGCGGCCGAGGCTGGTATTGGATCCGCCGAGGGGCGATGGTTCGGTGAATGATGCTTCTGTGAAGGCGACAAACAAGGGCAATCCGTTCGGCGCGGCGAGGCCCAGGGAGGAGGTGTTGGCTGAGAAGGGATTGGACTGGAAGAAGATGGATTCAGAGATTGAGGCGAAGAAGACGAGCCGGCCCACGAGTTCTCACTCCAGCAGGCCTTCCAGTGCTCAGTCCAATCGCTCTGAGGGTCCCGGGTTGCAGGGGGTCGATGCTGTGCCGAAATCGAGGCCCAAGTTGAATCCGTTTGGGGATGCCAAGCCTCGGGAGATTCTGTTGGGTGAGCGAGGCATGGATTGGAGGAAAATTGATCTTGATTTGGAGCATCGCTCTGTTGACAGGTTTTCTTTTGTTTCTTGGTTAATTTATGCTTTTATGCATCCGTTTGTTCTTTGA 1218 0.5928 MSKPWGNIGAWAADSERAEAEEREAQAAAAAAETQNFPSLKEAISSKPKKKKGTTISLSQFNQGGFPSAGEHQGLTRDEMLALPTGPKERSPEEMQFNRLGGGFSSYDRSAGRSRDRDGGNNDGSWGGGGRRSYGGFDEERRGPNPRVSELDQPSRADEVDNWASVKKSVPAFDSGRQNRYGGGGGGGGGFGGGGGGFGGGGGGGFGGASRADGVDNWAVGKKAAPVRSSNFGSGFRDSGVEPDRWSRGGPSRETERTERPRLVLDPPRGDGSVNDASVKATNKGNPFGAARPREEVLAEKGLDWKKMDSEIEAKKTSRPTSSHSSRPSSAQSNRSEGPGLQGVDAVPKSRPKLNPFGDAKPREILLGERGMDWRKIDLDLEHRSVDRFSFVSWLIYAFMHPFVL 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g03964 405 MobiDBLite consensus disorder prediction 1 362 - -
Vimu11g03964 405 MobiDBLite consensus disorder prediction 294 320 - -
Vimu11g03964 405 Coils Coil 13 35 - -
Vimu11g03964 405 MobiDBLite consensus disorder prediction 321 339 - -
Vimu11g03964 405 MobiDBLite consensus disorder prediction 50 69 - -
Vimu11g03964 405 Pfam Plant specific eukaryotic initiation factor 4B 1 388 IPR010433 GO:0003743
Vimu11g03964 405 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B 349 385 IPR010433 GO:0003743
Vimu11g03964 405 MobiDBLite consensus disorder prediction 134 163 - -
Vimu11g03964 405 MobiDBLite consensus disorder prediction 241 266 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g03964 1 388 Eukaryotic Initiation Factors Gene Family AT3G26400 57.389 4.45e-100 306
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g03964 - - gmx:100784238 520.39