Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g03963 ATGGGAGTCTTCACATTTATCGTACGCAACTCCGGCGGCGAATGGACAGCCAAACAACATTCCGGCGACCTCGAGTCCTCTGCCGACTCCTCGTACGAACTTCAACGGAAGCTCGTCCAAGCCGCTCTCGCCGTTGACTCCTCCGGCGGCGTTCAGTCCTCTTACTCTCCTGTTTCCCCTTCCTCTGCCATATTTCAGGTAATAGTGGGTGGTGCAGTAATCGTTGGAGGTGGTGCGGTTGCAGCTGCACCTGCCGGAGGTGCTGCCCCAGCTGCTGATGCTGCCCCGGCCGCCGAGAAGAAGGAAGAAAAGGTGGAGGAAGAGTCCGATGAGGATATGGGTTTGGGTCTGTTTGATTAG 360 0.5694 MGVFTFIVRNSGGEWTAKQHSGDLESSADSSYELQRKLVQAALAVDSSGGVQSSYSPVSPSSAIFQVIVGGAVIVGGGAVAAAPAGGAAPAADAAPAAEKKEEKVEEESDEDMGLGLFD 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g03963 119 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P3-1-RELATED 1 119 IPR044252 GO:0003735|GO:0005840
Vimu11g03963 119 Pfam 60s Acidic ribosomal protein 72 118 - -
Vimu11g03963 119 Hamap 50S ribosomal protein L12 [rpl12]. 1 119 IPR027534 GO:0003735|GO:0005840|GO:0006414
Vimu11g03963 119 MobiDBLite consensus disorder prediction 83 119 - -
Vimu11g03963 119 MobiDBLite consensus disorder prediction 105 119 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g03963 1 69 Cytoplasmic Ribosomal Protein Gene Family AT4G25890 73.913 6.80e-33 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g03963 K02942 - gmx:100527385 112.464