Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g03913 ATGCTTCTAATACCTTCCTTGTGTCAAAGTGAAGTAGCAACTGGTGTGTACATTGTTACTCTGAGACAAGCTCCTGCTTCTCACTACCATCATGAGTTGATCACAGTGGGTAACAAGTCTGGAAAGTCTGGACATGGTGTGTCTGGGAGAAGAAGAACTAGAATTCACAAACCAAGACATCAGAATGTTACAAAGACAGATAAGGGATATGGTTCATACTTTGCCCGAGTTCATGACTCGTTGTTGAATAAGGTCTTTAAGGGGGAGAAATATCTGAAGCTCTATAGCTATCATTACTTGATTAATGGATTTGCTGTGCTGGTTACCCAACAGCAGGCAGACAAACTTTCAAGTAGAAGAGAAGTTTCCAATGTGGTTTTGGATTTTTCTGTGAGGACTGCAACCACCCACACTCCACAATTTTTGGGGCTGCCACAGGGAGCTTGGTTTCAAGCAGGTGGGTTTGAAACTGCTGGAGAAGGAATCACTATTGGGTTTGTTGACACTGGCATTGATCCTACACACCCTAGTTTTGCTGATGATAAATCTCAACATCCTTTCCCTATTCCTGCTAATTTCTCTGGCGTCTGTGAGGTTACTCCAGATTTTCCATCTGGTTCTTGCAATAGGAAGCTTGTTGGGGCAAGACACTTTGCAGCTTCTGCTATAACCAGAGGAATATTCAACTCATCTCAGGACTATGCTTCTCCCTTTGATGGAGATGGCCATGGCACGCACACAGCTTCTGTTGCAGCTGGAAACCATGGAATTCCAGTGGTTGTTGCTGGACAATTTTTTGGAAATGCTAGTGGGATGGCTCCTCATTCGCACATTTCCATTTACAAGGCACTATACAAGAGATTTGGAGGATTTGCGGCAGATGTTGTTGCAGCCATTGACCAGTACATACCAATATGTGATTGCTTGGTAAACTACATGATTATTGTTATCCATATTTCCATTAAGGCAGCTCAGGATGGTGTTGACATAATATGCTTGTCAATCACTCCTAATAGGCGTCCTTCTGGTATTGCAACTTTTTTCAACCCAATTGACATGGCATTGCTGTCAGCTGTAAAAGCAGGTATTTTTGTAGTGCAAGCTGCTGGAAACACTGGACCATCACCTATGAGCATGTCCTCCTTTAGTCCTTGGATCTTTACAGTTGGTGCCACCTCTCATGATCGTGTTTATAGCAACTCCCTATGTCTTGGAAATAATGTGACCATACCTGGAGTTGGACTTGCACAATCAACAGCTTTGCAGGATTTGTTTCACAGTATTGATTCAGAAGTCCCTTCCGGTTTCAACTTGTATGAATCAAATTAG 1329 0.4281 MLLIPSLCQSEVATGVYIVTLRQAPASHYHHELITVGNKSGKSGHGVSGRRRTRIHKPRHQNVTKTDKGYGSYFARVHDSLLNKVFKGEKYLKLYSYHYLINGFAVLVTQQQADKLSSRREVSNVVLDFSVRTATTHTPQFLGLPQGAWFQAGGFETAGEGITIGFVDTGIDPTHPSFADDKSQHPFPIPANFSGVCEVTPDFPSGSCNRKLVGARHFAASAITRGIFNSSQDYASPFDGDGHGTHTASVAAGNHGIPVVVAGQFFGNASGMAPHSHISIYKALYKRFGGFAADVVAAIDQYIPICDCLVNYMIIVIHISIKAAQDGVDIICLSITPNRRPSGIATFFNPIDMALLSAVKAGIFVVQAAGNTGPSPMSMSSFSPWIFTVGATSHDRVYSNSLCLGNNVTIPGVGLAQSTALQDLFHSIDSEVPSGFNLYESN 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g03913 442 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 164 175 IPR023827 -
Vimu11g03913 442 Gene3D - 395 419 - -
Vimu11g03913 442 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 7 132 IPR037045 -
Vimu11g03913 442 CDD Peptidases_S8_3 134 439 IPR034197 -
Vimu11g03913 442 Pfam Peptidase inhibitor I9 16 134 IPR010259 -
Vimu11g03913 442 ProSiteProfiles Serine proteases, subtilase domain profile. 139 442 - -
Vimu11g03913 442 Gene3D Peptidase S8/S53 domain 161 394 IPR036852 GO:0004252|GO:0006508
Vimu11g03913 442 PRINTS Subtilisin serine protease family (S8) signature 159 178 IPR015500 -
Vimu11g03913 442 PRINTS Subtilisin serine protease family (S8) signature 239 252 IPR015500 -
Vimu11g03913 442 Pfam Subtilase family 159 400 IPR000209 GO:0006508|GO:0008236
Vimu11g03913 442 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 87 414 IPR045051 -
Vimu11g03913 442 SUPERFAMILY Subtilisin-like 134 416 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g03913 Vimu-Chr11 61130215 61133737 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g03913 14 419 Subtilisin-like Serine Gene Family AT4G20430 68.873 0.0 561
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g03913 - - gmx:100814065 717.613