Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g03912 ATGTTCAAACTGATTCATGCACGACATGCTTTGAACAAAACCATAACAGTTGCTGATGCTATGTATATTGGTGAGTGTCAAGATGCAAGTATATTCAGTCAGGATTTGGTTCAGGGCAACCTTTTGATCTGTAGCTATTCAGTCCGATTTGTGCTTGGGCTCTCCACCATCAAACAGGCCATGGAAACAGCCATGAACCTTAGTGCGGTTGGAGTTGTTTTCTCCATGGATCCTTTTGTGTCTTCTTTTCAGCTTAACCCAGTTCCAATGAAAATGCCTGGCATAATAATTCCATCTGCAAATGATTCCAAGATATTACTGCAATACTACAATTCTTCACTGGAAATAGATGGGGACTCTAATAAAATTGTTAAATTTGGGGCTGTTGCTAGTATTGGTGGGGGATCAGAAGCTAACTACAATAATGAGGCCCCAAAGGTTGTGTATTATTCTGCCAGGGGACCAGATCCAGAGGACAGTCTTCCTCATGAAGCTGACATTATGAAACCCAATTTGGTAGCACCTGGAAATCTTATATGGGCTGCTTGGAGTTCTGTTGCCTCTGATTCTGTTGAATTTCTAGGTGAGAATTTTGCATTGATGTCTGGCACGAGCATGGCTGCACCTCATGTTGCTGGTCTTGCTGCTCTAGTTAAGAGAAAGTTTCCCAATTTCAGTCCTGCAGCCATTGGATCAGCACTTTCCACCTCAGCTTCTCTGTATGACAGCAGTGGGAGGTCAATAATGGCTCAGAGATCATATCCTACCACAGACCTTAACCTATCTCCAGCAACTCCCTTTGACATGGGAAGTGGTTTTGTGAATGCTACTGCAGCATTAAATCCGGGATTGCTTTTTGATTCTAGTTATGATGATTACATGTCATTCCTATGTGGTATCAATGGTTCAACTCCTACAGTGCTAAACTACACCGGTCAAAATTGCTGGACTTATAACTCTACAGTTTATGGCCCTGATCTGAACTTGCCCTCAATCACAATAGCAAGGTTGAACCAATCTAGAGTAGTGCAAAGAACAATCCAAAACATTGCTGGAAATGAAACATACAGCGTTGGTTGGAGTGCTCCATATGGCACTTCTATGAAAGTGTCTCCAAATCACTTCTCTATTGGCAGTGGGGAGAAACAAATCTTGTCTGTGATCTTCAATGCAACCAGCAACAGCTCTTCTGCCAGCTATGGGAGAATTGGGTTGTATGGTAACCAAGGTCATGTTGTCAACATTCCCGTAGCAGTCATTTTCAAAATCTTATAA 1275 0.4227 MFKLIHARHALNKTITVADAMYIGECQDASIFSQDLVQGNLLICSYSVRFVLGLSTIKQAMETAMNLSAVGVVFSMDPFVSSFQLNPVPMKMPGIIIPSANDSKILLQYYNSSLEIDGDSNKIVKFGAVASIGGGSEANYNNEAPKVVYYSARGPDPEDSLPHEADIMKPNLVAPGNLIWAAWSSVASDSVEFLGENFALMSGTSMAAPHVAGLAALVKRKFPNFSPAAIGSALSTSASLYDSSGRSIMAQRSYPTTDLNLSPATPFDMGSGFVNATAALNPGLLFDSSYDDYMSFLCGINGSTPTVLNYTGQNCWTYNSTVYGPDLNLPSITIARLNQSRVVQRTIQNIAGNETYSVGWSAPYGTSMKVSPNHFSIGSGEKQILSVIFNATSNSSSASYGRIGLYGNQGHVVNIPVAVIFKIL 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g03912 424 CDD PA_subtilisin_like 18 113 - -
Vimu11g03912 424 SUPERFAMILY Subtilisin-like 96 331 IPR036852 GO:0004252|GO:0006508
Vimu11g03912 424 Gene3D - 5 140 - -
Vimu11g03912 424 Gene3D - 297 421 - -
Vimu11g03912 424 ProSitePatterns Serine proteases, subtilase family, serine active site. 203 213 IPR023828 -
Vimu11g03912 424 ProSiteProfiles Serine proteases, subtilase domain profile. 1 280 - -
Vimu11g03912 424 Gene3D Peptidase S8/S53 domain 141 293 IPR036852 GO:0004252|GO:0006508
Vimu11g03912 424 Pfam Subtilase family 113 242 IPR000209 GO:0006508|GO:0008236
Vimu11g03912 424 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 25 418 IPR045051 -
Vimu11g03912 424 Pfam Fibronectin type-III domain 326 419 IPR041469 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g03912 Vimu-Chr11 61127937 61129848 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g03912 2 423 Subtilisin-like Serine Gene Family AT4G20430 65.012 0.0 574
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g03912 - - gmx:100814065 774.237