Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g03907 ATGGAATTTTTCATGCAATCTCTGTTAATTATCGTGATCACCATGGTTGCATCTCTGTATGTTTTGCTGAAAAGAAGAGCAGGTAGCACTAAAACCTTGCCACCTGGTAGCTTTGGGTGGCCCCTAATGGGTGAAACCTACCAATTTTTGTTCATCAAGAGTGAACATTTCATTCAAGAGAGGGTCAAAAAGTACTCCTCACAGATCTTCCACACAAACATACTAGGAGAGCCAACAGTGGTTTTTTCTGGTCCTGCAGCAAACAAATTTGTCTCCACCAATGAGACAAAGCTTCTCAAAGTTTGGTACATGAAGACTCAGCGCAGGTTCTTCAATATTCCTGATCAAATACATACACCAAACCTGAAACCAAAACAAGAAGCTGCATCTCCTGCTCCAGTGAAGATCTTGGGGATTCTGAAACCTGAGGGAATAGCAAGGTACATGGGAAACAAGGTTGAATTAACCATGCATCAACATTTCATGACACACTGGGAAGGAAAAACAGAAGTGAAGGTGTACCCTTTGGTGAAGGCCTTTACCCTCACACTGGTTTGTCAATTCTTCTTAGGCATTGATGAACCAAAATTAGGCAGTGAGTTTGAGTACTTGTATTTTGGGATCTACTCCGCTCCTGTGAATTTCCCGGGCTCTGCATACCGTAGGGCACTGAAGGCTTCAGCTACAATAAGGAAAGAGATCCAATTTCTGATCAAAGAGAAGATTGATGCTTTGTCCAAGGGGCAAGTTGTGGATGACCTACTAGCACACGTAGTTGGTGCTGAGCAGGGTGGAAAATATGTGCCAAGAATTGAAATAAGCAACATCATCATGGGGCTGATGAATTCCAGCTACATGCCAATAGCTATTACTCTGGCTTCCATGATCAAACACATTGGACAAAGGCCTGATATCTACCAAAAAATCGTATCCGACTGGGACAGCATACAGAAACTGAAATACACATGGGCTGTTGCACAGGAGACTATGAGACTCAATCCAACTGCACCAGGTGTGTTCAGAGAGGTCATAACAGATATCACATATGAAGGTTTTACTATTCCAAAAGGGTGGAAGATTTTTTGGTCACTGGATGGGACAAATATGGATCCCAACTACTTTCCTGAACCTGAAAGTTTTGACCCCTCAAGGTTTGAAGGAACTATTCTTCCTGCTCCATACACTTGGATACCCTTTGGAGCTGGACCAAGATCTTGCCCTGGACAAGACTACACGCGGTTTGTGGTCCTCAATTTCATTCACATTCTAATAAACAAGTTCAAGTGGGAAGTTACAGATCCTGCTGAGAAAGTTTCAGGGGGTCTAATACCTACCCTAGCAGAGGGATTATTTATCCGTCTTTATCACCACTAA 1374 0.4287 MEFFMQSLLIIVITMVASLYVLLKRRAGSTKTLPPGSFGWPLMGETYQFLFIKSEHFIQERVKKYSSQIFHTNILGEPTVVFSGPAANKFVSTNETKLLKVWYMKTQRRFFNIPDQIHTPNLKPKQEAASPAPVKILGILKPEGIARYMGNKVELTMHQHFMTHWEGKTEVKVYPLVKAFTLTLVCQFFLGIDEPKLGSEFEYLYFGIYSAPVNFPGSAYRRALKASATIRKEIQFLIKEKIDALSKGQVVDDLLAHVVGAEQGGKYVPRIEISNIIMGLMNSSYMPIAITLASMIKHIGQRPDIYQKIVSDWDSIQKLKYTWAVAQETMRLNPTAPGVFREVITDITYEGFTIPKGWKIFWSLDGTNMDPNYFPEPESFDPSRFEGTILPAPYTWIPFGAGPRSCPGQDYTRFVVLNFIHILINKFKWEVTDPAEKVSGGLIPTLAEGLFIRLYHH 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g03907 457 PRINTS E-class P450 group I signature 396 406 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g03907 457 PRINTS E-class P450 group I signature 363 387 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g03907 457 PRINTS E-class P450 group I signature 323 341 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g03907 457 PRINTS E-class P450 group I signature 406 429 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g03907 457 PANTHER CYTOCHROME P450 26 31 434 - -
Vimu11g03907 457 SUPERFAMILY Cytochrome P450 31 454 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g03907 457 Gene3D Cytochrome P450 23 454 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g03907 457 PRINTS P450 superfamily signature 324 335 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g03907 457 PRINTS P450 superfamily signature 397 406 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g03907 457 PRINTS P450 superfamily signature 301 314 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g03907 457 Pfam Cytochrome P450 215 433 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g03907 457 CDD CYP90-like 61 456 - -
Vimu11g03907 457 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 399 408 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g03907 Vimu-Chr11 61097316 61100282 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g03907 32 360 Cytochrome P450 AT5G36110 31.667 3.26e-63 207
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g03907 K20667 - var:108321875 852.432
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g03907 11 61097316 61100282 Vimu11g03907 11 61097316 61100282 ECH