Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g03905 ATGGCCGGAACTTCGTCTTCTGCAATTGACTTCTCTGAATTTCCATCAAATCTTAATGTCCTTGTCATTGATACTGACCCCGGAGATCTTGAATTCATCGAGAAATCATGCAAAGAGAATTTTCGTTGTAAAGAGAAATCTCATAAAGCTGTAATATGCTCTGAATCTTCAATGGCTATGGATGTTTTGCTGAATGAAGAAATAGACATTCATTTGATCGTCATGGAGCTTCATATGCCAATGATGAATGACTTTGAATTCCTGCAATTTCTCGATGAAGAAGGATTTGATATTGCTTTTGCTTTCCAACTTGGAGCTATCCACTATTTCATGAAACCCTTCCATGATCTGTTAGATTTGTGGGGACCTTTCTTAAGGCATTATTACGACATGCTGCGTAACTTAGATGATGAGACAAGTGATGGAGAAGGCAAAGCCAATGATACCCTCAACAAGAAAGATGATGCCCTAGTATGA 477 0.3836 MAGTSSSAIDFSEFPSNLNVLVIDTDPGDLEFIEKSCKENFRCKEKSHKAVICSESSMAMDVLLNEEIDIHLIVMELHMPMMNDFEFLQFLDEEGFDIAFAFQLGAIHYFMKPFHDLLDLWGPFLRHYYDMLRNLDDETSDGEGKANDTLNKKDDALV 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g03905 158 MobiDBLite consensus disorder prediction 139 158 - -
Vimu11g03905 158 Gene3D - 11 128 - -
Vimu11g03905 158 SUPERFAMILY CheY-like 16 115 IPR011006 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g03905 Vimu-Chr11 61048809 61049468 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g03905 2 154 Response Regulator Gene Family AT4G16110 22.619 2.01e-08 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g03905 - K14491 vra:106769483 220.32