Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g03781 ATGGCATGTGTTCGTGATTTTTTGGTTGCAGCGCGACAGCAACATGACGTCAAGCAGAGTATTTCATTTCCAACCTCCATTATTATGAACTTCATGTTTCTAGCTGTCCATTTGCTCGGTTCATTTTCAGATGCAAATTTAAGTTATCAACACAACAAGACAACTAATTGGTTTTGCAGGTCAAAGACACGTTCTGTGTACGAAGTGACTAAGGATGCTACCTGGGAAACTGTTTGCTTTCTTACTCTTTACTCTGAGTTGTTTCAGATGGCTAGAATATGCAGAATGCAAAGTTCCCCCAGAGGAGGACTTCTGGGTAGGAGCTCGAACTTTCGGGTAGGAGCTCATTTTTCCTTGAAGGAGCTCGGCCAACCAGGTGCTCGACCAGTAAGGTACACAACACCAACCTCACGAACCTGTATGTTGCGTATGAAGACGACACAACAAACTCACGAAACTTTTGGATCAAGAAAAAAAGATGACAGCCGGGTAGACAACACCAACCTCACGAACCTATGTGATGATGATAGGAGAAGATTTGATCATCCACAAGAGGTGTTTACTCCAATCCCAAGATACCCACAAGAAACAACACTAGAATCCAAGAAAAGACCACGATTCAGAGACCAAGCTCTGATACCATGTCAAAATATCAAGACAATTGATGCTCTTAAGGAAATCACTAGCACGATGGGGGCCACCAATTGGGAGTTTGACAGTGATTATTGTTCTGTTAAAATGCTGAGATCAACACCAGATCCACCTAAAGAATCTGAAAGGAGAATTGATTTTGAGAAACTGCCATATTATTGGAGTTCTTCCAAGCTACTTGTGGAGTATGGAGAAATTGGAGATGTTGATGTAAATGTGATGGAAAATGATGAAAATGTTCTCTATGTAGGAGATGGAGATGTGTTAGGTAGTGAAGCTGCTAAATATTATATTAATCATAAAAGTCACTGGGGATTTAGCAGCACTGGGGACTTCATGGATGATGGCAATTACCTAAATGCTCATTTTACTAGGGCTTTGACATCTTCAAATTTGCCTGAACTATATCAAACGGCACGTGTTGCTCCACTTTCGCTTACTTATTTTCTCTATTGCTTGGAAAATGGGAAATATACTGTAAAACTCCACTTCGCAGAAATACAATTTACAAACGATAAGACATATAGTAGTCTTGGGAAGCGCTTATTTGATATCTATATTCAGGAAAAATTAGTTAGGAAGGATTTTAATATTGAAGATGAAAGTCACGGTCCTCAAAAACCACTTACTTTCCCATACAATGTCAGTGTAACAGAGAATATTCTGGAGATTCGATTCTATTGGGCTGGAAAGGGAACAACAAGGGTTCCTGGTGGTGGAGCTTATGGTCCCCTCATATCAGCACTCTCCATTGTTTCTCGTGAGTTGTATAATGATTCAACTCCATCCAAACCTTGTTCAGAACAAAAAAGTGCAAGGCGTATGATAATTGTTGGAGTTGGGTTTGGTGTTACCGCTCTGTGCCTTGTTATCATCATTGTTGGAATCTTTTTGTGGAATGGCTGCTTCAAAGGAATGATTAGGGCTGTAAAAGGTACTGAAAGACAAGATTCTAAAATGGGGACATTTACATTAGAACAAATTAGAGAGGCCACAGAGGATTTCAGTCCAGTTAACAAGATTGGAGAAGGTGGATTTGGTCCTGTGTACAAGGGTCAATTATCTGATGGTACACTGGTAGCTGTCAAACAACTCTCATCAAAGTCACGACAGGGGAATCGTGAATTTTTAAATGAGATAGGCTTGGTATCTTGTTTGCATCACCCTAATCTTGTGAAACTTCATGGATGTTGCATTGAAGGGAATCAATTAATGTTGGTGTATGAGTACATGGAAAATAATAGCCTGGCTCAAGCTTTGTTCAGCTCAAAAGATCAACTTAATCTTGATTGGCCAACAAGGCTTAGGATCTGCATTGGCATAGCAAAAGGTCTTGCATTTCTTCACGAAGAATCAAGACTCAAGATTGTTCATCGAGACATCAAGGCTACTAATGTGTTACTAGATGGGAATTTAAACCCCAAAATATCTGACTTTGGGTTGGCTAGGCTTGATGATGAAGAGAAGACCCATATCACCACCCGAATAGCTGGAACAATAGGGTACATGGCACCAGAATATGCATTATGGGGTCGCTTGTCTTACAAGGCTGATGTTTACAGTTATGGGGTTGTGGTCTTGGAAGTTGTTAGTGGGAAGAGCAATAACAATTACATGCCTAGTGACAATCGTGTCTGCCTTTTAGACAAGGCATGTCATCTACAGCGTACTGAAAGACTAATAGAACTGGTGGATGAAAGGTTGGGATCAAAGATAAAACCAACAGAAGCAATAATTTTGATGAAAGTTGCTCTTCTGTGCACGGATGTATCACCTTCATTTAGGCCTACAATGTCTGAGGTTGTAAACATGCTCGAAGGAAGAGCAAGAATTCCAGATAAAATCCCACAGTCAAGTGACTTTAGTGAAGATATAAGGTTTAAATCCATGAGGGATATCTATCAGCAAAGGGAAAACCACAGTTTAAGTTCAAGCCAATTAGACAATTCAACAGGAGTTCTCACACTTACCTCGCCCTAA 2631 0.4025 MACVRDFLVAARQQHDVKQSISFPTSIIMNFMFLAVHLLGSFSDANLSYQHNKTTNWFCRSKTRSVYEVTKDATWETVCFLTLYSELFQMARICRMQSSPRGGLLGRSSNFRVGAHFSLKELGQPGARPVRYTTPTSRTCMLRMKTTQQTHETFGSRKKDDSRVDNTNLTNLCDDDRRRFDHPQEVFTPIPRYPQETTLESKKRPRFRDQALIPCQNIKTIDALKEITSTMGATNWEFDSDYCSVKMLRSTPDPPKESERRIDFEKLPYYWSSSKLLVEYGEIGDVDVNVMENDENVLYVGDGDVLGSEAAKYYINHKSHWGFSSTGDFMDDGNYLNAHFTRALTSSNLPELYQTARVAPLSLTYFLYCLENGKYTVKLHFAEIQFTNDKTYSSLGKRLFDIYIQEKLVRKDFNIEDESHGPQKPLTFPYNVSVTENILEIRFYWAGKGTTRVPGGGAYGPLISALSIVSRELYNDSTPSKPCSEQKSARRMIIVGVGFGVTALCLVIIIVGIFLWNGCFKGMIRAVKGTERQDSKMGTFTLEQIREATEDFSPVNKIGEGGFGPVYKGQLSDGTLVAVKQLSSKSRQGNREFLNEIGLVSCLHHPNLVKLHGCCIEGNQLMLVYEYMENNSLAQALFSSKDQLNLDWPTRLRICIGIAKGLAFLHEESRLKIVHRDIKATNVLLDGNLNPKISDFGLARLDDEEKTHITTRIAGTIGYMAPEYALWGRLSYKADVYSYGVVVLEVVSGKSNNNYMPSDNRVCLLDKACHLQRTERLIELVDERLGSKIKPTEAIILMKVALLCTDVSPSFRPTMSEVVNMLEGRARIPDKIPQSSDFSEDIRFKSMRDIYQQRENHSLSSSQLDNSTGVLTLTSP 876
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g03781 876 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 281 471 - -
Vimu11g03781 876 MobiDBLite consensus disorder prediction 147 167 - -
Vimu11g03781 876 SMART serkin_6 552 822 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vimu11g03781 876 CDD STKc_IRAK 558 824 - -
Vimu11g03781 876 SUPERFAMILY Protein kinase-like (PK-like) 537 823 IPR011009 -
Vimu11g03781 876 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 237 858 - -
Vimu11g03781 876 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 522 627 - -
Vimu11g03781 876 MobiDBLite consensus disorder prediction 152 167 - -
Vimu11g03781 876 Pfam Malectin domain 292 466 IPR021720 -
Vimu11g03781 876 ProSiteProfiles Protein kinase domain profile. 552 828 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vimu11g03781 876 Pfam Protein tyrosine and serine/threonine kinase 556 822 IPR001245 GO:0004672|GO:0006468
Vimu11g03781 876 FunFam Putative LRR receptor-like serine/threonine-protein kinase 628 834 - -
Vimu11g03781 876 Gene3D Transferase(Phosphotransferase) domain 1 628 840 - -
Vimu11g03781 876 Gene3D - 288 473 - -
Vimu11g03781 876 ProSitePatterns Serine/Threonine protein kinases active-site signature. 673 685 IPR008271 GO:0004672|GO:0006468
Vimu11g03781 876 Gene3D Phosphorylase Kinase; domain 1 522 627 - -
Vimu11g03781 876 MobiDBLite consensus disorder prediction 855 876 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g03781 Vimu-Chr11 59850541 59865637 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g03781 294 862 Receptor kinase-like Gene Family AT1G07650 52.316 0.0 567
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Vimu11g03781 PK_Tyr_Ser-Thr 1.7e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g03781 - - gmx:100305385 895.575