Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g03776 ATGGCTGATTATTCAGGAGGATCTGAAACACACGAGGTAGTTGTCAATGTAACCAAGGACACCCCAAAAACAGTGGAACGCTCCGACTCCTTTGTCTCTGTTCCTTTCTTGCAGAAGGTGGCTCATCCTAGTCTTGCTTTTTTGATAGCTGAGGTGGTGGGCACATATTTCTTGATATTCGCAGGATGTGGTTCGATTGTGGTGAACAATAACCACTACAACGTGGTACCAGCTTATGTTGCAGCTCAACTGCTAGGAGGCACACTTGCAAGTGGAACTCTGAAGCTGTTGTTTATGGGAAAGCATGACCAGTTTTCAGGAACACTTCCAACTGGAACTGATCTGCAAGCTTTTGTGCTTGAATTCATAATCACATTTTTCCTTATGTTTGTCATATCAGGGGTTGCCACTGATAACAGAGCGATTGGTGAGTTGGCTGGGATTGCAATTGGGTCTACAATACTGCTGAACGTGATGATTGCAGGGCCAGTGACAGGAGCATCAATGAACCCTGTGAGAAGCCTTGGACCTGCTTTTATGCACGCAGAATACAAAGGAATATGGATATTCATTTTGGCACCAATTCTTGGAGCTGTGGCTGGAGCATGGGTCTACAATATCATTAGGTACACAGATAAGCCACTGCGTGAGATCACCAAGAGTGCCTCTTTTCTCAAAGGACGTACTGCTGCCACCAAATAG 702 0.453 MADYSGGSETHEVVVNVTKDTPKTVERSDSFVSVPFLQKVAHPSLAFLIAEVVGTYFLIFAGCGSIVVNNNHYNVVPAYVAAQLLGGTLASGTLKLLFMGKHDQFSGTLPTGTDLQAFVLEFIITFFLMFVISGVATDNRAIGELAGIAIGSTILLNVMIAGPVTGASMNPVRSLGPAFMHAEYKGIWIFILAPILGAVAGAWVYNIIRYTDKPLREITKSASFLKGRTAATK 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g03776 233 Pfam Major intrinsic protein 76 205 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vimu11g03776 233 SUPERFAMILY Aquaporin-like 44 219 IPR023271 -
Vimu11g03776 233 Gene3D Glycerol uptake facilitator protein. 72 220 IPR023271 -
Vimu11g03776 233 PRINTS Major intrinsic protein family signature 46 65 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vimu11g03776 233 PRINTS Major intrinsic protein family signature 188 208 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vimu11g03776 233 PANTHER AQUAPORIN NIP2-1 31 72 IPR034294 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g03776 Vimu-Chr11 59816269 59818381 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g03776 48 233 Major Intrinsic Protein MIP AT5G37810 47.210 4.27e-68 209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g03776 K09874 - gmx:100813448 344.354