Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g03766 ATGGGAAGTGATGATGTGAAGATGGTGAGTTTTTGGGTGAGTCCATTTGGTAAAAGGGTTGAATGGGCTTTGAAACTGAAGGGGATAGAGTTCCTGGTCTGGTTCATGACCACAAACCCATCACTCGTCATTCTTGAATACATTGATGAAACATGGAAGCAGTATCCATTGCTACCTCATCAAAGAGCTCTTGCTCGCTTTTGGGCTACTTCTGTTGAAAAAAGAGACGAGTCTTTTAAAAGCATGGTACATCCATTTTCTGCAACCGAGAACGATGATGTATTATTTCCTTGTGGTGTGAAACGATCATTTGATCCCTTTGATGACCCCAAAAGCACCAGCAAAATTTGGTTAATATTCCATGCATATAACCATTTCCCTTTTCCTCAAACGGATGGATTTCCTCAAACCTGCCGCTGTAATGAAGAAACAGTCAGAGCCCTGTTCAAGATCCTCAGAGAAGTAACATCCTTTCTGGGCATTTCATCAAATACCTTTCTTGAACTTTCAGAGTTACCCCAAGTGGAGGTCTTCCACTTAAACTGCAATTTGACTAAATTTGTGGGCGATATTAGTCAAATTTGTCGACTAGAAAAGAAGATGGGAAGTGAAGAAGTGAAGGTGGTGAGCTTTTGGGTGAGTCCATTTGGGAAGAGGGTGGAGTGGGCCTTGAAGCTGAAGGGAATAGAATATGAATACATAGAAGAAGATATCTTCAACAAGAGCAATCTCCTTCTCCAGTTGAACCCGGTTCACAAGAAGGTTCCGGTTCTTGTCCATGCCCACAAACCCATCGCTGAATCATTCATCATCCTTCAATACATTGATGAAATTTGGAAGCAGTATCCACTGCTGCCACAACATCCTTATCAAAGAGCACTTGTTCACTTTTGGGCCGACTTTGGTGAGCGAAAGCTTTTGGATACATCATGGGTTGCAATGTGCAGCAGCGGGGATGACAAGGAAGAGGCTCTGAAAGTAGCTAGAGAAGCAATGGAGAAGATTGAAGAAGAGATAAAGGGGAAGAAGTTTTTTGGAGGAGACAACATTGGGTACCTTGATCTTGCCCTTGGATGGATCTCTTACTGGCTTCCTGTTTTTGAGGAAGTTGGATCCATGCAGATAATGGACCCAATGAAATTTCCAGCCACCACTGCATGGATCAGCAATTTTCTGAGCCACCCTGTGATCAAGGAGAACTTGCCCCCAAGAGACAACATGCTTGTTTACTTCGACAGTCGCAGAAAGGCACTTTCTTCATCTTTTCAGGGTTGGTTCAAGGTTTAG 1287 0.432 MGSDDVKMVSFWVSPFGKRVEWALKLKGIEFLVWFMTTNPSLVILEYIDETWKQYPLLPHQRALARFWATSVEKRDESFKSMVHPFSATENDDVLFPCGVKRSFDPFDDPKSTSKIWLIFHAYNHFPFPQTDGFPQTCRCNEETVRALFKILREVTSFLGISSNTFLELSELPQVEVFHLNCNLTKFVGDISQICRLEKKMGSEEVKVVSFWVSPFGKRVEWALKLKGIEYEYIEEDIFNKSNLLLQLNPVHKKVPVLVHAHKPIAESFIILQYIDEIWKQYPLLPQHPYQRALVHFWADFGERKLLDTSWVAMCSSGDDKEEALKVAREAMEKIEEEIKGKKFFGGDNIGYLDLALGWISYWLPVFEEVGSMQIMDPMKFPATTAWISNFLSHPVIKENLPPRDNMLVYFDSRRKALSSSFQGWFKV 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g03766 428 Coils Coil 318 338 - -
Vimu11g03766 428 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 204 283 IPR004045 -
Vimu11g03766 428 Pfam Glutathione S-transferase, N-terminal domain 205 277 IPR004045 -
Vimu11g03766 428 SUPERFAMILY GST C-terminal domain-like 277 416 IPR036282 -
Vimu11g03766 428 CDD GST_C_Tau 289 411 IPR045074 GO:0004364|GO:0006749
Vimu11g03766 428 SUPERFAMILY Thioredoxin-like 5 71 IPR036249 -
Vimu11g03766 428 SFLD Main.3: Omega- and Tau-like 202 420 IPR045073 -
Vimu11g03766 428 FunFam Tau class glutathione S-transferase 201 287 - -
Vimu11g03766 428 SFLD Main (cytGST) 202 420 - -
Vimu11g03766 428 Gene3D Glutaredoxin 1 38 - -
Vimu11g03766 428 Gene3D Glutaredoxin 200 284 - -
Vimu11g03766 428 Gene3D Glutaredoxin 39 95 - -
Vimu11g03766 428 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 41 81 IPR045073 -
Vimu11g03766 428 Pfam Glutathione S-transferase, C-terminal domain 320 395 IPR004046 -
Vimu11g03766 428 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 288 418 IPR010987 -
Vimu11g03766 428 CDD GST_N_Tau 206 279 - -
Vimu11g03766 428 SUPERFAMILY Thioredoxin-like 206 305 IPR036249 -
Vimu11g03766 428 Gene3D - 285 421 - -
Vimu11g03766 428 FunFam Tau class glutathione S-transferase 285 421 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g03766 Vimu-Chr11 59705246 59707459 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g03766 2 75 Glutathione S-transferase Gene Family AT2G29420 39.423 3.79e-13 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g03766 K00799 - tpra:123914566 380.563