Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g03746 ATGAAGAATTGCGATGAATGGAAACCTTTCCTAGCAATGATAGCTATTGATTTTTCTTTAACCATGGTGAACATCCTTCTCAAGCAAGTCCTCCAAAAAGGAATGAACCATTTGGTTTTTGTCACATATCGTCTGTCAGTTTCTACTATATTTTTAGCCCCCATCAGCTACTTTAAGGAAAGAAATAGAAGACCACGGCTCACATTTCAAATTTTATGCTACCTTTTCTTCAGTGCCATAATTGGGGCATCCGTCACACAATACTTCTTCCTTTTGGGGATCCAATATACCTCAGCCACATTTGCCTGTGCATTTGTCAATATGGTGCCGGTGATAACCTTCATCATGGCATTGCCATTTGGGCTAGAAATAGTGAACATTAAATGCACGGGTGGGAAAGCGAAGATTCTGGGCACGTTTGTGTGTGTAGGAGGGGCATTAGTGTTGACACTTTACAGAGGAAAACCCTTGTTTGATGTGTCTCACTATAAAGCAACGGTTCCTCCGGTAGCCATGAGATCTGCAATGGACGAAGGTGGTTCCAGTGGTAGAACAACACAGAAATGGAGCATTGGTGTAATAGCTTTGATGATGGGAACCTTGTTTTGGTCTTTTTGGTTTATTCTACAGTCAAAGATAGGGAAGAGGTATCCTTTCCAGTATTCTAGCACAGCCATCATGACCTTCTTTGGAGCCATGCAAGCAGCTATTCTTGGTTTGTCCACAGGCACCAACTTCTCCTCCTGGATTCTCAAGGATAAGATGCAAATAATCACTGTTCTTTATTCTGGGATAATTGGGTCAAGTATGTGCTACGTGGGGATGTCATGGTGCGTGAAGAAGAGGGGTCCAGTCTTTACAGCAGCATTCAGCCCTCTGGTTCAGATAATGTCGGGCATGATTGATATCCCAGTCTTGCACGAGCAGCTTCATCTTGGAAGTGTGGTGGGCTCCGTCTTGGTCATGATTGGCTTGTACATTCTCCTTTGGGGCAAAACCAAGGACATAATGCAGAATACTGCCACTAAGTTGCTCCAAGAAACTCAGCAAACCAAGGAACAAGAACCACAAGTATAA 1077 0.4336 MKNCDEWKPFLAMIAIDFSLTMVNILLKQVLQKGMNHLVFVTYRLSVSTIFLAPISYFKERNRRPRLTFQILCYLFFSAIIGASVTQYFFLLGIQYTSATFACAFVNMVPVITFIMALPFGLEIVNIKCTGGKAKILGTFVCVGGALVLTLYRGKPLFDVSHYKATVPPVAMRSAMDEGGSSGRTTQKWSIGVIALMMGTLFWSFWFILQSKIGKRYPFQYSSTAIMTFFGAMQAAILGLSTGTNFSSWILKDKMQIITVLYSGIIGSSMCYVGMSWCVKKRGPVFTAAFSPLVQIMSGMIDIPVLHEQLHLGSVVGSVLVMIGLYILLWGKTKDIMQNTATKLLQETQQTKEQEPQV 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g03746 358 Pfam EamA-like transporter family 191 329 IPR000620 GO:0016020
Vimu11g03746 358 Pfam EamA-like transporter family 24 149 IPR000620 GO:0016020
Vimu11g03746 358 SUPERFAMILY Multidrug resistance efflux transporter EmrE 43 153 - -
Vimu11g03746 358 SUPERFAMILY Multidrug resistance efflux transporter EmrE 250 333 - -
Vimu11g03746 358 PANTHER WAT1-RELATED PROTEIN 8 337 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g03746 Vimu-Chr11 59478133 59480163 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g03746 5 336 Nodulin-like Gene Family AT1G11460 38.438 3.80e-85 259
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g03746 - - gmx:100791663 592.423
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g03746 11 59478133 59480163 Vimu2g00804 2 4926049 4928338 PCT