Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g03711 ATGGCCTCCACCAAGGAACGCGATAACTTCGTCTACGTTGCCAAGCTCGCCGAACAAGCCGAACGCTATGAAGAAATGGTGGATGCAATGAAGAATGTAGCGAAGCTAAACGTGGAACTGACGGTTGAGGAGCGGAACCTTTTGTCGGTGGGGTACAAGAACGTGGTGGGTGCTCGTAGGGCTTCGTGGAGGATTCTTTCGTCGATTGAGCAGAAGGAAGAGGCGAAAGGGAACGATGTGAGTGTGAAGCGGATAAAGGAATATAGGCAGAAGGTGGAGTCTGAGTTGTCCAATATCTGCAGTGATATCATGACTGTTATTGATGAGCACCTTATCCCCTCTAGCACTACTGGTGAACCTAGTGTCTTTTTCTACAAAATGAAGGGTGACTATTACCGGTATCTCGCGGAGTTCAAGTCCGGTGAAGAGAGAAAAGAGGCTGCTGATCATTCCATGAAAGCGTATCAGCATGTGTCCAGTAACCAAGGGCAGAGAGGAGAAACGATATACATTGGGCATGTGAATATTGAAATAGTGATTCTAGTGGTTCTTTATCATCAAGGTTGTAGTATACACGGTAATGAGGGAAAAATTAACCGAGGGAGCGAGGGAACAGCTTCCACTACTGCAGAGGCTGAGTTACCTCCTACGCATCCTATCCGACTGGGTCTGGCTTTGAACTTCTCTGTCTTTTATTATGAAATTTTGAACTCTCCTGAAAGGGCTTGTCACCTTGCAAAGCAGGCATTTGATGAAGCAATCTCTGAGTTGGATACTCTGAGTGAGGAGTCTTACAAGGACAGCACCCTAATTATGCAGCTTCTGAGGGACAACCTCACCTTGTGGACTTCTGACATCCCTGAAGATGGAGAAGAACAAAAGGTGGATTCTGTCCGAGCTGCTGGTGGTGAAGAGGCATAG 921 0.4701 MASTKERDNFVYVAKLAEQAERYEEMVDAMKNVAKLNVELTVEERNLLSVGYKNVVGARRASWRILSSIEQKEEAKGNDVSVKRIKEYRQKVESELSNICSDIMTVIDEHLIPSSTTGEPSVFFYKMKGDYYRYLAEFKSGEERKEAADHSMKAYQHVSSNQGQRGETIYIGHVNIEIVILVVLYHQGCSIHGNEGKINRGSEGTASTTAEAELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDIPEDGEEQKVDSVRAAGGEEA 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g03711 306 ProSitePatterns 14-3-3 proteins signature 2. 265 284 IPR023409 -
Vimu11g03711 306 PANTHER 14-3-3 PROTEIN 7 286 IPR000308 -
Vimu11g03711 306 PRINTS 14-3-3 protein zeta signature 88 112 IPR000308 -
Vimu11g03711 306 PRINTS 14-3-3 protein zeta signature 39 68 IPR000308 -
Vimu11g03711 306 PRINTS 14-3-3 protein zeta signature 119 141 IPR000308 -
Vimu11g03711 306 Coils Coil 13 33 - -
Vimu11g03711 306 SMART 1433_4 7 296 IPR023410 -
Vimu11g03711 306 Pfam 14-3-3 protein 14 157 IPR023410 -
Vimu11g03711 306 Pfam 14-3-3 protein 205 283 IPR023410 -
Vimu11g03711 306 ProSitePatterns 14-3-3 proteins signature 1. 45 55 IPR023409 -
Vimu11g03711 306 Gene3D - 1 298 IPR036815 -
Vimu11g03711 306 SUPERFAMILY 14-3-3 protein 6 157 IPR036815 -
Vimu11g03711 306 SUPERFAMILY 14-3-3 protein 206 290 IPR036815 -
Vimu11g03711 306 MobiDBLite consensus disorder prediction 287 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g03711 Vimu-Chr11 59123816 59126827 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g03711 1 306 14-3-3 family AT2G42590 66.774 4.10e-144 405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g03711 K06630 - gmx:100807980 462.225
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g03711 11 59123816 59126827 Vimu11g03711 11 59123816 59126827 ECH