Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g03659 ATGGAGGAAGAAGCTTCGATTCTGCGACTGGAAATTCTGCAAGGCCCTCGCCAAGGCGAAACCCTAGACTTCAAACCCGGATCCGCTGTCCGAATTGGGCGGGTCGTGAAGGGCAACACCCTCCCCATTAAGGACCCCGGTATCTCCTCCAAACACCTCTCCATTCTCAACGAATCCGGCAAATGGATGCTCAGCGACCTAGACTCCTCAAACGGCACCGTTTTGGACACTTCAAATATTCCCCCGAACACTCCCATCGCTCTCCACCATGACTCCACCATCAAGATCGGAGAATTCACCTCCATCCGCGTCATCTTTCTCCCTTCCCAACAACAACAACATGCTCTACCCCCCAGACGGAACCCCACGCGCCGCCGTCGAGCCGATCCGGCTCCAGCTCCGGTTCCGGCTCCTTCTCAGCCGGTTAAGCGACGCGGCCGACAAAATGGCAGGGGGGTGAAGGATGGGGATAAGAGTCAAGTTCAGAGCGTTGATGAAAACGAGGCGAGTGTAGTGGACGTGGAATCTGAATGGGTGGATCCTCCCGCGAGGGTTACGCGGAAGTCGAACAGAGGACGGAGTGTGGTTAAAGAATCGAGTATTGATAATTTGATTATTGCGGAGAAGGTGGAGGAACATAAGGATACGCGGAATCCGAGTTTGGTTGTGGTTTCTGTTTCCAGTGATGATGGTTTGGATAATCCGGTGGTTGAGGAACCGAAGAAAGGGCGTCGAACACGGAATTTGAAGAACACGCGTGGAGTGGCTGCGAAAATTGAGAATGTTGAGAAGAAGACGAAGATGGGTGTTGCTGGAAAGAAGGAATTGGATAAGGAATCGAGTGTTGATATTTTGATTCTTGCAGAGAAGGTGGAGGAGCAGAAGAATACGCGGAATTCGAGTTTGGCTGTGGTTTCTGTTTCCGGTGATGATAATTTGGATAATCCGGTGGTGGAGGAACCGAAAAAAGCGCGCGGGACACGGAATTCGAAGAACACGTGTGGAGTGACTGCGAAAACTGGGAATGTTGAGAAGAAGATAAAGATGGTTGTTGCTGGAGAGAGGGAATTGGATGAAGATGGTGAAGATGGGAATGGTGGGAAAGAGGCTTGTGATGGGAAGGAAAAGGGGAATTCGAATGAAGATGATAGGAATTGGCCTGATTTGAATAAGATGACACTTGGTGAGTGGCTTGACTTCTTGGAAGTTCACTTCCCCAAACAGATAATAGATGAAACAGAAAAGATGTTTGATTCGATGACTCAAACAGCTGAGAGACTCCTCGAGTACATCGCAGAGAGGCAAGGATAA 1311 0.4996 MEEEASILRLEILQGPRQGETLDFKPGSAVRIGRVVKGNTLPIKDPGISSKHLSILNESGKWMLSDLDSSNGTVLDTSNIPPNTPIALHHDSTIKIGEFTSIRVIFLPSQQQQHALPPRRNPTRRRRADPAPAPVPAPSQPVKRRGRQNGRGVKDGDKSQVQSVDENEASVVDVESEWVDPPARVTRKSNRGRSVVKESSIDNLIIAEKVEEHKDTRNPSLVVVSVSSDDGLDNPVVEEPKKGRRTRNLKNTRGVAAKIENVEKKTKMGVAGKKELDKESSVDILILAEKVEEQKNTRNSSLAVVSVSGDDNLDNPVVEEPKKARGTRNSKNTCGVTAKTGNVEKKIKMVVAGERELDEDGEDGNGGKEACDGKEKGNSNEDDRNWPDLNKMTLGEWLDFLEVHFPKQIIDETEKMFDSMTQTAERLLEYIAERQG 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g03659 436 MobiDBLite consensus disorder prediction 148 162 - -
Vimu11g03659 436 ProSiteProfiles Forkhead-associated (FHA) domain profile. 30 80 IPR000253 GO:0005515
Vimu11g03659 436 SMART FHA_2 29 80 IPR000253 GO:0005515
Vimu11g03659 436 Gene3D - 1 109 - -
Vimu11g03659 436 MobiDBLite consensus disorder prediction 231 260 - -
Vimu11g03659 436 Pfam FHA domain 30 97 IPR000253 GO:0005515
Vimu11g03659 436 MobiDBLite consensus disorder prediction 354 388 - -
Vimu11g03659 436 SUPERFAMILY SMAD/FHA domain 7 107 IPR008984 GO:0005515
Vimu11g03659 436 PANTHER NUCLEAR INHIBITOR OF PROTEIN PHOSPHATASE-1 8 263 - -
Vimu11g03659 436 MobiDBLite consensus disorder prediction 109 175 - -
Vimu11g03659 436 MobiDBLite consensus disorder prediction 313 336 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g03659 1 128 PP2C-type Phosphatase Gene Family AT5G19280 29.452 9.78e-06 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g03659 - - vum:124842134 723.391