Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g03648 ATGAACCATGGGTACGTTGTTTATGATTTGGTTATGGTCACTCTATCCTTGTCCCTCATAATTCTCGGTGCTGTCCTCTTTGTTGCATGCAAGAAGAAACCAGTTGAGTGTGAAGAAACTGTTGCTGTGAAGCACTGTGCTCGAGTGTACTCGTTGATGGACATTGATGCTGTCACTGATAGCTTCAACCACAGGAGAGTACTGGGAAAGGGTCCTCTGGGAACCGTGTATGTTGGGGTGCAAGAGAATGGAGAGCTTGTGGCTGTGAAAAGGATCCATCCCGTGCTTGTGTTGAGCAACGCAGGGTTGGGATTCTCATCAGTGTTGAAATGGCTCTCTTCAGTTCAACATCCCAACGTAGTTCCTATAATTGGATTCTCAGAAGCACCGGGTGAAAGAGTTATAGTGATGGAGTTTGGGCGCATGATGAGCTTGGAGTTCTGTTTGCATCAAAACGTTAATGGGGCATCACTTTTGGATTGGAACAAGAGGATCAGAATTGCAGCAGGAGCAGCTAGAGGGCTTCAGTATTTGCATGAAGTGGCAACACCAAACATCGTACATGGGCGAGTCAAGTCATCAAATGTTTTAATTGATGTCAACTTTTGTCCTAGGATTTGTGATTATGGTCTCAACTTTTTGGCAGCACGAGAAACGAGAGAGCTGGTAGGTTATGTGGATGATGAGTATTGGAATGAAAGAGGGGGTGGTGGAAGCAAGGAAAGTGATGTTTATGGTTTAGGAGTTGTATTGCTTGAGCTATTAAGTGGTAGAGAATGCAATGAAGGAATGATAGTAGAGTGGGGTTTGCCTTTGATAAAGGCTTTGGGTTTTGGTGAAGTTTTGGATCCTAGGTTGGTAATTCCTTCTGACATGAAGAATGTAGTTAGATTAGCCAAAGTTGCTTCGGCTTGTGTTGGTAATTCCAGAAAGTGTAGACCTTCCATAGCACAAGTGGCTACTATTTTGAACAATTTAGAGATGGAAGTGTGCGTTTCTGATCTTTAA 1008 0.4355 MNHGYVVYDLVMVTLSLSLIILGAVLFVACKKKPVECEETVAVKHCARVYSLMDIDAVTDSFNHRRVLGKGPLGTVYVGVQENGELVAVKRIHPVLVLSNAGLGFSSVLKWLSSVQHPNVVPIIGFSEAPGERVIVMEFGRMMSLEFCLHQNVNGASLLDWNKRIRIAAGAARGLQYLHEVATPNIVHGRVKSSNVLIDVNFCPRICDYGLNFLAARETRELVGYVDDEYWNERGGGGSKESDVYGLGVVLLELLSGRECNEGMIVEWGLPLIKALGFGEVLDPRLVIPSDMKNVVRLAKVASACVGNSRKCRPSIAQVATILNNLEMEVCVSDL 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g03648 335 PANTHER OS01G0253100 PROTEIN 37 327 - -
Vimu11g03648 335 FunFam serine/threonine-protein kinase-like protein ACR4 29 139 - -
Vimu11g03648 335 SUPERFAMILY Protein kinase-like (PK-like) 41 323 IPR011009 -
Vimu11g03648 335 Gene3D Phosphorylase Kinase; domain 1 25 139 - -
Vimu11g03648 335 FunFam Receptor protein kinase CRINKLY4 141 330 - -
Vimu11g03648 335 Pfam Protein kinase domain 63 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vimu11g03648 335 Gene3D Transferase(Phosphotransferase) domain 1 142 333 - -
Vimu11g03648 335 ProSiteProfiles Protein kinase domain profile. 62 326 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g03648 Vimu-Chr11 58472194 58473590 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g03648 47 323 Receptor kinase-like Gene Family AT3G59420 38.832 1.13e-51 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Vimu11g03648 Pkinase 7e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g03648 - - gmx:100809726 542.347