Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g03602 ATGGCGATAATAGGAAGGAGAGTTTCGGGAGAAGGAACCATTGAGTATTGTGAGGTCACCATTAGGGTTCTATTTGAGGTTCAGAAGGGCACAGAAGGAGATTGCTTTAAGAAGTCAGAGGGAGAACTAGGTAATGGAGAACGAGGAGTGCATAGTGACCTGAGAGTTAACGATGAAGAGGAATTAACCAGGTACGGAGAGCTAATTCCGTTCTTTTTGAATTATTGTGACCCTGGTTGTTATTCTAGTTTATATATGACCACGCAATGTTTGACTTTTATGAATTATGAGTTGGGGAAATGTGTCTTCTTTGTGTTTGTGAGGGAGTATGCTGGTTGTGGTGTGATTTGGTCCAATTTTCTGCATTTTTTGAAACCAGTATCCAAATTATATTTCAGAAAGTTATATGTTGTTGATGCACGACCAAGAAAAAATGCATTGGCTAATGGAGCCATGGGAGGTGGTTCAGAATTATCATCAAACTATTTTCAATCCGAGGTTGTGAAAGGCTTGAACTGA 519 0.3969 MAIIGRRVSGEGTIEYCEVTIRVLFEVQKGTEGDCFKKSEGELGNGERGVHSDLRVNDEEELTRYGELIPFFLNYCDPGCYSSLYMTTQCLTFMNYELGKCVFFVFVREYAGCGVIWSNFLHFLKPVSKLYFRKLYVVDARPRKNALANGAMGGGSELSSNYFQSEVVKGLN 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g03602 172 ProSiteProfiles Myotubularin phosphatase domain. 1 172 IPR010569 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g03602 Vimu-Chr11 57820432 57821225 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g03602 126 168 Protein tyrosine phosphatase (PTP) family AT3G10550 79.070 3.45e-16 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g03602 K18081 - vum:124824561 135.961