Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g03571 ATGAAGTACTTGAAGGCTGTGATCAAAGAGAGTCTTCGGCTTCATCCACCACTTCCCTTAACAGTGCCTAGGAGATGCATGGAAGATGTAAAAGTGAAAGGGTATGATATTGGAGCTGGCACTCAGGTGTTGGTGAATACATGGGCTATTGCAAGAGACTCTTCATGTTGGCAGCAGCCTCTTGAGTTTAAACCAGAAAGGTTCCTAACCAGACAAGTGGAACTTTCAAGAAATCAAAGCCATGTTGGTACAGGAAGAAGGGAGATTAAAGAAGATGAGAGATCATTCTATCCACCTCACAACTCATGA 309 0.4337 MKYLKAVIKESLRLHPPLPLTVPRRCMEDVKVKGYDIGAGTQVLVNTWAIARDSSCWQQPLEFKPERFLTRQVELSRNQSHVGTGRREIKEDERSFYPPHNS 102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g03571 102 PANTHER STEROID 21-HYDROXYLASE-RELATED 1 87 - -
Vimu11g03571 102 MobiDBLite consensus disorder prediction 81 102 - -
Vimu11g03571 102 Gene3D Cytochrome P450 1 98 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g03571 102 SUPERFAMILY Cytochrome P450 1 76 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g03571 102 PRINTS E-class P450 group I signature 5 23 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g03571 102 PRINTS E-class P450 group I signature 46 70 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g03571 102 MobiDBLite consensus disorder prediction 76 102 - -
Vimu11g03571 102 Pfam Cytochrome P450 1 78 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g03571 Vimu-Chr11 57366063 57368502 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g03571 1 87 Cytochrome P450 AT2G30770 56.044 3.64e-27 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g03571 - - var:108336564 147.132