Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g03530 ATGGCATTGGCAAGGATTGCTAGGGCGAACTTCAGAAAATCAAGAGGTGCTTATGGTAGTTATGCGAGTGAGAAGGATTTATTCAAAGTGGGAGGATACACAAGCATACGGGACACGACTTCCCATGTAAATTTCAATTCAGATGAGAAGTTTTCATATGTTCCAACAATTAAGGAACATAACTGCGTGAACTTTGCAATGAGGGGAATATCAGGAACTCCATACTATCGGTTTCCTTCTGCTAACGCACAGACGGTTGTTGAGGAGTCAGAGTCAGAGTTGGAGAACGATCAGCGTAGATATGCAGGACTAGAGGCAACAAAGCCAGGTGAAAAGCCTAGGGTGGTTGTTCTTGGTACGGGTTGGGCTGCGTGTCGCTTCCTCAAAGGGCTTGACACCAAAATCTATGATGTTGTGTGCATATCACCAAGAAATCACATGGTTTTTACTCCTTTGCTGGCTTCAACATGTGTTGGAACCCTGGAATTCAGAACTGTTGCTGAGCCTGTCTCCAGAATACAAGATGCATTAGCGAAAGACCCCAACTCGTTCTTCTTTCTAGCTTCTTGCACAGGCATCGACACTGGCAAACATGAAGTCTATTGTGAGGCAGTCAACAATGGTGAATTGCCCCGAGAGCCTTACGAATTTAAAGTCGCGTATGACAAGCTTGTCATTGCAGCAGGAGCCGAGGCTTTGACTTTTGGTATCAAGGGAGTAGAGGAAAATGCCTTTTTTCTTCGTGATGTGAACCATGCTCAAGAAATAAGGAAGAGACTTCTCCTTAATCTGATGCTTTCGGAAAATCCAGGCATATCGGAACAAGAAAAGAAACGCCTTCTACACTGTGTAGTTATTGGAGGTGGCCCCACAGGAGTGGAGTTTAGTGGTGAATTGAGTGATTTCATCACCAGGGATGTTCATGAGCGTTATACTCATGTCAAAGATTACATTCACGTTACACTAATTGAGGCAAATGAGATACTGTCATCCTTTGATGTTAGCCTACGGCAATATGCAACAAAGCACTTAACAAAGTCTGGTGTCCGTCTTAAGCGTGGTGTGGTGAAGGAAGTGCATAGCAAAGAGATCATTCTGAGTGATGGAACAAAAGTTCCTTATGGCCTCTTGGTCTGGTCCACAGGAGTTGGTCCTTCAAAGTTTGTGAAAGCCTTAAATCTTCCTAAATCTCCAGGCGGAAGAATTGGTGTAGATGAATGGTTTCGTGTTCCTTCTGTGGAAGATGTCTTTGCCCTTGGAGATTGTGCTGGTTTTCTTGAACAAACTGGAAGGCCTGTGCTTCCAGCTCTAGCTCAGGTTGCTGAAAGGGAAGGGAAGTTTCTTGTGGAGCTGTTCAACAAAGTTGGGAAGCAGAATGGAGGCAAGGCTTTCTCTGCAAAAGGGACGCCACTTGGGGACCCTTTTGTGTATAAGCATATTGGGAGCATGGCATCTGTAGGTGGCTACAAAGCACTGGTTGATCTACGGCAGTCAAAGGATGCAAAGGGATTGTCACTTGCTGGTTTTGTTAGCTGGATGATATGGCGCTCCGCATATCTGACACGTGTCCTTAGCTGGAGGAACAGGCTTTACGTGGCAGTAAACTGGGCCACCACATTAGTCTTTGGCAGAGACAATAGTAGGATAGGTTGA 1653 0.4525 MALARIARANFRKSRGAYGSYASEKDLFKVGGYTSIRDTTSHVNFNSDEKFSYVPTIKEHNCVNFAMRGISGTPYYRFPSANAQTVVEESESELENDQRRYAGLEATKPGEKPRVVVLGTGWAACRFLKGLDTKIYDVVCISPRNHMVFTPLLASTCVGTLEFRTVAEPVSRIQDALAKDPNSFFFLASCTGIDTGKHEVYCEAVNNGELPREPYEFKVAYDKLVIAAGAEALTFGIKGVEENAFFLRDVNHAQEIRKRLLLNLMLSENPGISEQEKKRLLHCVVIGGGPTGVEFSGELSDFITRDVHERYTHVKDYIHVTLIEANEILSSFDVSLRQYATKHLTKSGVRLKRGVVKEVHSKEIILSDGTKVPYGLLVWSTGVGPSKFVKALNLPKSPGGRIGVDEWFRVPSVEDVFALGDCAGFLEQTGRPVLPALAQVAEREGKFLVELFNKVGKQNGGKAFSAKGTPLGDPFVYKHIGSMASVGGYKALVDLRQSKDAKGLSLAGFVSWMIWRSAYLTRVLSWRNRLYVAVNWATTLVFGRDNSRIG 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g03530 550 PANTHER NADH DEHYDROGENASE 100 549 IPR045024 GO:0003954|GO:0006116
Vimu11g03530 550 SUPERFAMILY FAD/NAD(P)-binding domain 112 327 IPR036188 -
Vimu11g03530 550 PRINTS FAD-dependent pyridine nucleotide reductase signature 282 300 - -
Vimu11g03530 550 PRINTS FAD-dependent pyridine nucleotide reductase signature 401 423 - -
Vimu11g03530 550 PRINTS FAD-dependent pyridine nucleotide reductase signature 221 239 - -
Vimu11g03530 550 FunFam Internal alternative NAD(P)H-ubiquinone oxidoreductase A1, mitochondrial 104 548 - -
Vimu11g03530 550 SUPERFAMILY FAD/NAD(P)-binding domain 282 450 IPR036188 -
Vimu11g03530 550 Coils Coil 80 107 - -
Vimu11g03530 550 Pfam Pyridine nucleotide-disulphide oxidoreductase 114 445 IPR023753 GO:0016491
Vimu11g03530 550 Gene3D - 104 549 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g03530 Vimu-Chr11 56711406 56714475 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g03530 433 549 Chloroplast and Mitochondria Gene Families AT4G21490 33.058 3.63e-13 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g03530 K03885 - gmx:100814927 979.163