Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g03450 AGTCAAACTTTCATATATTATATAAAGAAGCAGCTTCAGAGAAATAGCTACAAAGAGAAAGATACTCTAAACTCAGAATTAGCAAGAGCTTCAAAAATTAGCGTTGCAATGGAGAGAAAAACCCTGGCCATTATGTTCTTTTTCCTCCTCGTCTTAACTGCTGATGTATGTGTGAAGAAAGCAGAAGCAGATTGTTATACACCAAGTGCACATTTCAAAGGAGCGTGCTTTCAGAGTGACAACTGCAATTATCAGTGTACGAGAGAAGGTCATCCCGGCGGCGAATGTCAAGGCTTCATCCCTCGCCGCTGCATGTGCATTTGTTAA 327 0.4098 SQTFIYYIKKQLQRNSYKEKDTLNSELARASKISVAMERKTLAIMFFFLLVLTADVCVKKAEADCYTPSAHFKGACFQSDNCNYQCTREGHPGGECQGFIPRRCMCIC 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g03450 108 Pfam Gamma-thionin family 65 107 - -
Vimu11g03450 108 Gene3D - 61 108 IPR036574 -
Vimu11g03450 108 PANTHER DEFENSIN-LIKE PROTEIN 1 41 108 - -
Vimu11g03450 108 SUPERFAMILY Scorpion toxin-like 65 107 IPR036574 -
Vimu11g03450 108 ProSitePatterns Gamma-thionins family signature. 63 86 IPR008176 GO:0006952
Vimu11g03450 108 SMART gth_4 64 108 IPR003614 GO:0006952
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g03450 37 106 Plant Defensins Gene Families AT5G63660 37.143 9.77e-10 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g03450 - K05055 ncol:116260928 62.3882