Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g03445 ATGGCTTCCCGCAATCCCAGCAATAAAAGGGTGGGCCCCGAAGAAGCTTCTCTTGACAAGCGTCGCAGGGGCACCGGAGCTGAGAAAATGGAGCGACAGGGCGGTCTGGCTGCTGCTGGTAGGCCTAGAACGCCGTTTTCCGTTGTCACAAATTGCTCAGACCTTAAAACGACCAGTGATGTCACCGATGCGGTTGATTTCACGAAGGAGGAGGTGGAGGCTTTGCTTAATGAAAAGAAGAAGGGAAATACCTATGATAGTAAGAAAAAGATGGAGCAGATGACGGATCTCATCAAGCGCCTTAAGGCCTGCGTTCGCTGGTATAAAAGGATAGAAGAAGGGTATGTTCAAGAAAAGGAAAAGCTTCAGTCTGAGCTAGAGGCTTCTGAGAAGAAGTGCAGTGATACCGAGACTGAGATGAAGAATAAGATTGATGAGTTGGAGGAGACTCTATCTGATTCGAGGAGGAAAAATTCTTGTCTAGAAGAGAGAATTGTGAAGGAAGAGTCAGATAAATTGGAAGCAATTAATTCTTATGGTAAAGAAAAGGAACTCAGAACTAAAGCTGAGAAAGTACGGGATGAGAAGTCAGCTGAGCTTGAGAAAGTTCGGGATGAGAAATCAGTTGCTGAGAAGAAGGCCATTTCAAATGAAGATTTGTACAAGCGATCACAGGAGTATAATATGAGCTTGCAGCAGTACAATAGTCGTCTTCAGTTTGATCTTGAAACAGTTAATGAGGCCCTTAAACGGCATGAAACTGAGAAAGCAGCCATGGTTGAGAGCCTTAGCAATTTAAGAGGACACAATAAGGCATTGCAGGATCAGTTGGTATCTCTTAAAGTTTCACAGGACGAGACTATAAAGCAGAAAGAAATTTTAGCAAATGAGCTCAAATGTGTTCGTGAGGAGTTAAAGCAAGTTAGAGATGACCGTGACCGTCAGTTGGAGCAAGTACATACCCTATCGGGAGAAATAGCGAGGCACAAAGAATATACTGGGAAAACATGTACACAATTGGATACGTTGATGATTAAAACAAATGCTCTTGAGGAAACTTGTTCATCTCAAAAGGATCAAATACACATACTGCAGCAGCAGTTGTTTGCGGAAAGAGAGAAGTTAAAGACTGCTGATCTATCAGCTTCTGAAACAAGAACAATGTTTGAAGAGCAGAAGAGGATTATACAGGGGCTACAGGAGCGTTTGGCAGATAAAGAATTTCAAGTAGTAGAAGGAGAGAAGTTAAGAAAAAAACTGCATAACACTATTTTGGAACTAAAAGGAAATATTCGTGTTTTCTGCCGTGTACGGCCGCTACTACCGGATGACAGTGCGGACACGGTTGTTTCATTCCCAACTTCAACAGAAGCGCTTGGTCGGGGCATTGAATTGGTGCAAAGCGCAGGGCAGAAGTACAATTTCACATTTGACAAGGTGTTCAATCACGAGGCTTCTCAGCAGGACGTTTTTGTAGAGATATCACAGCTGGTACAAAGTGCACTTGATGGCTACAAGGTGTGCATCTTTGCATACGGACAGACGGGCTCTGGTAAAACCTATACTATGATGGGTAGGCCTGATGAGCCAGATCTGAAAGGGTTGATACCCCGTTCTTTAGAACAGATATTTCAGACTAGCCAGTCTCTAAAAGACCAAGGGTGGAGGTACACAATGCAGGTTAGTATACCGCATCCTGATTTTCGAATTTCATGTGGCCACATCTACTTATGGAAACTAAAAAGTTTAATTGAACCATTCCAGGCATCAATACTGGAAATATATAATGAGACCATCAGGGATTTGTTATTAACAAATCGGTCAAGTGATCATGCACGAACGGAAAATAGTGCCTCCAGCAAGCAGTACACTATCAAACATGATGCAAATGGAAACACACATGTTTCGGACCTCACAATAAAGGATGTTTGTAGCGCAGATGAGATTTCCTCCCTCCTACGACAGGCAGCACAAAGCAGGTCAGTGGGAAGAACACAAATGAATGAACAGTCATCCAGAAGCCATTTTGTCTTTACGCTGCGTATAAGTGGGAAAAATGAGAACACTGAACAACAAGTCCAAGGTGTCTTAAACCTGATCGATCTTGCTGGAAGTGAAAGACTCTCAAGGAGTGGGGCAACTGGAGACCGGTTGAAGGAAACTCAGGCTATCAACAAAAGTCTATCGTCTTTGAGCGATGTCATATTTGCCTTGGGAGGAAAGAAAGAAGATCATGTTCCTTTTAGGAATTCAAAGCTGACGTATCTTCTCCAGCCATGTCTCGGTGGCGACTCCAAAACGTTGATGTTTGTCAACATCTCACCTGATCAGTCTTCCACTGGCGAGTCACTTTGTTCTCTCCGCTTTGCAGCCAGAGTCAATGCCTGCGAAATTGGGATTCCAAGGCGTCAGACTCAAACATCATCATCATCACGCTCCTCAGAATCCCGTTTGAGCTATGGTTAA 2466 0.4359 MASRNPSNKRVGPEEASLDKRRRGTGAEKMERQGGLAAAGRPRTPFSVVTNCSDLKTTSDVTDAVDFTKEEVEALLNEKKKGNTYDSKKKMEQMTDLIKRLKACVRWYKRIEEGYVQEKEKLQSELEASEKKCSDTETEMKNKIDELEETLSDSRRKNSCLEERIVKEESDKLEAINSYGKEKELRTKAEKVRDEKSAELEKVRDEKSVAEKKAISNEDLYKRSQEYNMSLQQYNSRLQFDLETVNEALKRHETEKAAMVESLSNLRGHNKALQDQLVSLKVSQDETIKQKEILANELKCVREELKQVRDDRDRQLEQVHTLSGEIARHKEYTGKTCTQLDTLMIKTNALEETCSSQKDQIHILQQQLFAEREKLKTADLSASETRTMFEEQKRIIQGLQERLADKEFQVVEGEKLRKKLHNTILELKGNIRVFCRVRPLLPDDSADTVVSFPTSTEALGRGIELVQSAGQKYNFTFDKVFNHEASQQDVFVEISQLVQSALDGYKVCIFAYGQTGSGKTYTMMGRPDEPDLKGLIPRSLEQIFQTSQSLKDQGWRYTMQVSIPHPDFRISCGHIYLWKLKSLIEPFQASILEIYNETIRDLLLTNRSSDHARTENSASSKQYTIKHDANGNTHVSDLTIKDVCSADEISSLLRQAAQSRSVGRTQMNEQSSRSHFVFTLRISGKNENTEQQVQGVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFALGGKKEDHVPFRNSKLTYLLQPCLGGDSKTLMFVNISPDQSSTGESLCSLRFAARVNACEIGIPRRQTQTSSSSRSSESRLSYG 821
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g03445 821 MobiDBLite consensus disorder prediction 13 29 - -
Vimu11g03445 821 Coils Coil 112 171 - -
Vimu11g03445 821 ProSitePatterns Kinesin motor domain signature. 695 706 IPR019821 GO:0003777|GO:0005524|GO:0007018
Vimu11g03445 821 Coils Coil 186 213 - -
Vimu11g03445 821 PRINTS Kinesin heavy chain signature 696 714 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vimu11g03445 821 PRINTS Kinesin heavy chain signature 665 682 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vimu11g03445 821 PRINTS Kinesin heavy chain signature 504 525 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vimu11g03445 821 PRINTS Kinesin heavy chain signature 746 767 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vimu11g03445 821 MobiDBLite consensus disorder prediction 1 46 - -
Vimu11g03445 821 MobiDBLite consensus disorder prediction 802 821 - -
Vimu11g03445 821 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 389 794 IPR027417 -
Vimu11g03445 821 Coils Coil 235 262 - -
Vimu11g03445 821 SMART kinesin_4 428 804 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vimu11g03445 821 Coils Coil 288 318 - -
Vimu11g03445 821 PANTHER KINESIN-LIKE PROTEIN KLP-3 248 808 IPR027640 GO:0003777|GO:0007018
Vimu11g03445 821 Gene3D Kinesin motor domain 371 798 IPR036961 -
Vimu11g03445 821 ProSiteProfiles Kinesin motor domain profile. 430 796 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vimu11g03445 821 MobiDBLite consensus disorder prediction 609 628 - -
Vimu11g03445 821 Pfam Kinesin motor domain 436 794 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vimu11g03445 821 CDD KISc_C_terminal 428 798 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g03445 Vimu-Chr11 55610808 55616268 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g03445 396 793 Calmodulin-binding Proteins AT5G65930 38.442 2.63e-74 262
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g03445 K10405 - gmx:100818140 1202.58