Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g03411 ATGTTGGAGTCTTTAGCTTGGTGCCAAAGCTTTAAGGGATATGACCTTACCAAACAGAAGAGTCCGGGTTGCTCTCATGCTATTTCACGAGTTTATAGAAATTCTATTTTTATGCTTTATTCTGTCAACAAGAAAGTGCCGGTACTGCCACATGGTGCTAGTCATTGGATATTTCATGGGAGTTCTGTGTCAGAAAATTTCTTTAAAAAGCCTCCTCTCTATGCTCCTTTAAGTTCTAGTTGGAAAGGTTTCTATAGGCCGCGTTGGGAAAGGCTGCAAACAAATGTAGCCTATGATGTTGCTGGAGCTGTTGATGTAATCAATGATTTAGGAATGGACACTCTTACTTTCTTGGCTGTGACCGTCATAATTGTGCCTATGTTCAAGTCACTGAAAGCCAGTCCTCTGTTTGAGATGGGTTTAGAGCTTTCACTTGCACGTCTAAAAGCTCTTGCAAAGTATGCTTTTGGAATGGGATTGGCTCAGGTTTTACTGTCTACTTTAGCATTTACTGCTTTTGAGCTTCCTCCAAATGGAGCTGTTGGAACAAAGATTTTGGAATTCCTTTTCCACTCTAGGCCTGACCTGGAAGTGGCTCCCACCTCCTACACATTCTTAAAGGTCCTAGTTGACCAGATACAGGATGATCCTGTGAACATAAGGAGTGTCGATGAAGCTGTAGTGATTGGTGCTGCTTTGTCTCTGTCATCTTCTGCATTTGTTCTACAGCTTCTAGCAGAGAAAGGTGAGCTTCCAACAAGATTTGGTTCAGCAACTCTTGGAATACTTCTTCTGCAGGACTTAGCAGTTGTTCCTCTTTTAGTCATACTTCCTATACTAGAGAGCCAGCTGATGGAGTTAACAAAGGAGATTTACTAG 879 0.4198 MLESLAWCQSFKGYDLTKQKSPGCSHAISRVYRNSIFMLYSVNKKVPVLPHGASHWIFHGSSVSENFFKKPPLYAPLSSSWKGFYRPRWERLQTNVAYDVAGAVDVINDLGMDTLTFLAVTVIIVPMFKSLKASPLFEMGLELSLARLKALAKYAFGMGLAQVLLSTLAFTAFELPPNGAVGTKILEFLFHSRPDLEVAPTSYTFLKVLVDQIQDDPVNIRSVDEAVVIGAALSLSSSAFVLQLLAEKGELPTRFGSATLGILLLQDLAVVPLLVILPILESQLMELTKEIY 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g03411 292 Pfam Sodium/hydrogen exchanger family 136 280 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Vimu11g03411 292 Gene3D - 133 289 IPR038770 -
Vimu11g03411 292 PANTHER K(+) EFFLUX ANTIPORTER 3, CHLOROPLASTIC 97 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g03411 Vimu-Chr11 55243563 55249404 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g03411 1 283 Inorganic Solute Cotransporters AT4G04850 54.769 2.17e-94 293
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g03411 K03455 - gmx:100798214 410.609